Aurantimicrobium photophilum: AURMO_00414
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Entry
AURMO_00414 CDS
T05480
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aum
Aurantimicrobium photophilum
Pathway
aum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AURMO_00414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aum03400
]
AURMO_00414
Enzymes [BR:
aum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AURMO_00414
DNA repair and recombination proteins [BR:
aum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AURMO_00414
Prokaryotic type
AURMO_00414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWR21031
UniProt:
A0A2Z3RWV8
LinkDB
All DBs
Position
386541..387257
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AA seq
238 aa
AA seq
DB search
MTINLTLEDLANKGLIDSSWVNQLLPVQSVLDQIAQRLNQEIDAGEQILPSSSNILRAFT
IPYDLVKVVIVGQDPYPTPGDAVGLSFSVSPDRHDLPRSLKNIFSELHADLGCDLPATGD
LSPWAEQGVMLLNRVLTVRSGEAGSHRGIGWEQVTEQALRALNDRVNKPLAAVLWGNDAK
SATEFLSNSVVIESAHPSPMSASRGFFGSRPFSKVNTALVEAGQTAINWPLPTQSALF
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaacctcactcttgaggatttagctaacaagggcttgattgattcgagctgg
gtcaatcaacttctcccagtacaaagtgttttggatcagattgctcagaggctcaatcag
gagattgacgcaggtgagcaaatactcccctcctcatcgaacattttgagggcgttcaca
attccatatgacctggtcaaagttgtcattgtggggcaggatccatatcccaccccagga
gacgcggtcggattgtctttttctgtttctcccgacagacatgatcttcctcgtagcttg
aagaacatcttctctgaactccatgcagacttaggttgcgatttacctgcaacgggggac
ttatctccttgggcggagcaaggagtcatgttgctcaaccgggtactcaccgtccgttct
ggcgaggccggttcccaccgaggaatcggatgggaacaggtaacagaacaggccttgagg
gcactcaatgacagagtgaacaaacccctggctgctgtgctctggggcaatgacgccaag
tctgccactgaattcctaagcaattcagtggtgattgagtctgcccatccgagcccgatg
tctgcttcacgaggattctttggctcgcgtccgttcagcaaggtaaatactgctcttgtt
gaagctgggcaaacagcaattaattggccattaccaactcaatctgccttgttctag
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