Aurantimicrobium photophilum: AURMO_00750
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Entry
AURMO_00750 CDS
T05480
Name
(GenBank) RNA polymerase principal sigma factor HrdB
KO
K03086
RNA polymerase primary sigma factor
Organism
aum
Aurantimicrobium photophilum
Brite
KEGG Orthology (KO) [BR:
aum00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AURMO_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aum03021
]
AURMO_00750
Transcription machinery [BR:
aum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AURMO_00750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AWR21358
UniProt:
A0A2Z3S312
LinkDB
All DBs
Position
728824..730608
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AA seq
594 aa
AA seq
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MATENTAPKAKGRFASLFGGKSKSSAVEPAPESAPSVKAPAAKTPAPKTPAKAAAKPAEK
PAAKAPAAKAPAKAAAKTDKPAAKTAAKPAVKAPAKAAEKPAAKAPAKAAAKPAVKAPTK
TAAKAPAAKTAAAKAPATKAPATKAAAPKAEPKSAAKAPAKAATKAPAKAVEAEKPAAKA
KKPTKAELEKMANALLTEEAAPAEIAPKRGRGRAKAVDPEADDEEVDEEDLVADVAIEAV
VIDVVDDEALEEDEDKPARPAVTEEPLPTGAIVLSMADDDDDIPVYSTAITGATADPVKD
YLKQIGKVPLLNAVEEVELALRIEAGLFAEDKLATKKNIPKQLERELRWVARDGQRAKSH
LLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQA
ITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVVEVQ
KYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQKQLESLLDSLSEREAGV
IRMRFGLGDGIPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctacagagaacacagcccccaaggctaaaggacgttttgcgtcgctctttggtgga
aagtccaagtcctctgctgtcgagccagctccggaaagtgctccctctgtgaaggctcct
gccgccaagactcctgctccaaaaacccctgcaaaagctgctgctaagcctgctgaaaag
cccgccgcaaaagcgcccgcagctaaggctcctgcaaaagcagcagcgaaaactgacaag
cccgccgccaaaactgctgctaagcctgcagtaaaggcacctgcaaaggcggctgagaag
cccgctgcgaaggcaccagctaaagctgctgcaaagcccgccgtaaaggcaccaactaag
actgctgcgaaagcacctgccgcaaagactgcagcggctaaggctcctgccaccaaagct
cctgcaactaaggctgctgcccctaaggccgagccaaagtcagcagcaaaggctcctgcc
aaagcagccactaaggctcctgctaaggctgttgaagcagagaagccagcagctaaggca
aagaagcccactaaagctgaactggaaaagatggcaaatgctctcttgaccgaagaagca
gcacccgcagaaatcgctcccaagcgtggtcgtggccgcgcaaaggcagtcgatcctgag
gcagatgacgaagaagtagacgaagaagatctcgtcgcagatgtcgctatcgaagcagtt
gtcattgacgttgttgacgacgaagcactcgaagaagatgaagacaagcctgcacgtcct
gcagtaactgaagaacctcttcccactggcgccattgttttgtccatggcagacgatgac
gatgacatccctgtctactccaccgcaatcaccggtgctacagctgaccccgttaaggat
tacctcaagcagatcggtaaagttcctctgctcaacgctgttgaagaagttgaacttgcc
ctgcgtattgaagctggtctctttgctgaagacaagctggcaaccaagaagaacattccg
aagcagctcgagcgtgaacttcgttgggtcgcccgcgatggccagcgcgccaagagccac
ctgctcggtgccaacctgcgtctggttgtttctcttgcgaagcgttacaccgggcgtggc
atgcagttcctggaccttatccaggaaggtaacctcggtctgattcgtgcagttgagaag
ttcgactacaccaagggcttcaagttctccacctatgcaacctggtggattcgtcaagca
attactcgcgctatggctgaccaggcacgaaccattcgtattcctgttcacatggttgaa
gtcatcaacaagctggcacgtgtacagcgtcagatgctccaggatctcggtcgcgaacca
actcctgaagagctctcacgcgaactcgacatgactcctgagaaggttgttgaagttcag
aagtatggccgcgagcccatctcgcttcacacgcctcttggtgaagatggtgacagtgaa
ttcggtgacctcatcgaggacaccgaagcagttgttccagctgatgcagtgggattcact
atgttgcagaagcagctggagtctctcctggattcactctctgagcgtgaagccggagtt
atccgcatgcgctttggtctgggcgatggcatccccaagaccctcgaccagattggtgac
accttcggtgtgactcgtgagcgtattcgtcagattgagtcgaagaccatggcgaagctt
cgtcacccttcgcgttctcagtctctgcgtgactacctcgaataa
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