Aurantimicrobium photophilum: AURMO_00868
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Entry
AURMO_00868 CDS
T05480
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aum
Aurantimicrobium photophilum
Pathway
aum03030
DNA replication
aum03430
Mismatch repair
aum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURMO_00868
03430 Mismatch repair
AURMO_00868
03440 Homologous recombination
AURMO_00868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aum03032
]
AURMO_00868
03400 DNA repair and recombination proteins [BR:
aum03400
]
AURMO_00868
Enzymes [BR:
aum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AURMO_00868
DNA replication proteins [BR:
aum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AURMO_00868
DNA repair and recombination proteins [BR:
aum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AURMO_00868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWR21472
UniProt:
A0A2Z3S5J5
LinkDB
All DBs
Position
complement(855835..859350)
Genome browser
AA seq
1171 aa
AA seq
DB search
MGKDNDSFVHLHVHSEYSMLDGAARVKPLVNAAVEAGMPAIAITDHGNMFGAYDFWNAAT
DTGIKPIIGTEAYLTPGTHRTDKTRIRWNNGGDDDVSGGGAYTHMTLLSSSTEGMHNLFK
MSSLASLEGYYFKPRMDRELLNTYGKGLIATTGCPGGEIQTRLRIGQYDEARAAAAEFRD
IFGKENFFVEIMDHGLDIERRVVTDLIKLSKDLGLPLVATNDLHYTHAHDADAHAALLCV
QSGSTLDDPNRFKFESNEFYLKSAAEMRRLFADYPEACDNTLLIAERCETSFEKRDLMPR
FPVPEGETEATWFEKEVAAGLARRFPNGVSDAHKAQAKYEVDVIIQMGFPGYFLVVADFI
AWARQQGIRVGPGRGSAAGSLASYAMGITELDPLHHGLIFERFLNPERVSMPDVDVDFDD
RRRGEVIRYVTEKYGSDRVAQIVTYGTIKAKQALKDSSRVLGMPYSVGEKLTKAMPPSIM
GKDITLTEIMDPQAPRYKEAADFRSVLESDVDAQTVFNTAQGIENLKRQWGVHAAGVIMS
AEPLMDVIPIMKREDDGAIITQFDQPPCESLGLLKMDFLGLRNLTVIQDALVNIQNNRGI
TVEPELLDLDSDPATYELLSRGDTLGVFQLDGGPMRALLRQLKPTNFEDISAVIALYRPG
PMGMNSHTNYALRKNGLQEIEPIHPELEEPLSEILGTTYGLIVYQEQVMAVAQKVAGFTL
GQADVLRRAMGKKKKSELDKQFADFEAGMLANGYSAPAVKILWDTLMPFADYAFNKAHSA
GYGVLSYWTAYLKANFPAEYMAALLTSVGDSKDKLGIYLSECRRMGLNVLAPDVNESDGV
FSAVGQDIRFGMGAIRNVGFGVVEHIKSARAEKGRFDSFHDFLKKVPVQVANKKTLESLI
KAGAFDAMGNTRRALVEIHEDAVESAVSLKRNEALGQVDLFGDMFEFTEEHSQVPDRPEF
TKRDKLAFEREMLGLYVSDHPLAGLELQLAKHATVTINDLTTSDTTMDGDIVVLAGLVTE
VQRRIAKKSGNAYGIIKLEDFGGEMDIMLLGRTYQEFGPMLETDLVLAVKGRVNVRDDGL
NIQAMSMFVPDVGAVVGEQGPLNLVLPEVRATSSTIGELSEVLKRHPGQSEVRLRLTRGA
TARIFELPARVNVSSDLYGELKSLLGPGCLG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggacaacgattctttcgttcaccttcacgttcattccgagtactcgatgctc
gatggtgctgcacgtgtcaagccacttgtgaatgcagctgtcgaggcaggaatgcctgcg
attgctattaccgatcacggcaatatgttcggcgcatatgacttctggaatgctgctaca
gacaccggcattaaaccaattattggtacggaggcgtacctcactcccggcactcatcgc
accgataaaacccgtattcgttggaataacggtggggatgatgacgtctcaggtggtggt
gcttatacgcacatgactctgttgtcgtcctcgaccgagggcatgcataacctcttcaag
atgtcctctttggcttcacttgagggctactacttcaagcctcgtatggaccgtgaactc
ctcaacacctacgggaagggcctcatcgcgacaacaggctgccctggtggtgaaattcaa
acccgcctgcgcattggtcaatatgatgaagcacgcgcagcggcggcagaattccgtgac
attttcggcaaagaaaacttcttcgttgaaattatggatcacggtctggatattgagcgt
cgagttgtcacagatctcatcaagctctctaaagatttagggttacctctcgttgcaacc
aacgatctccactacacgcatgctcatgacgctgatgcacacgccgcgttgttatgtgtg
cagtcgggatccactctggatgaccccaacagatttaagttcgaatcaaatgagttctat
ctcaagtcagccgctgaaatgcgccgactctttgctgactaccccgaagcctgtgacaac
acgttgctcatcgctgagcggtgtgaaaccagctttgaaaaacgtgatctcatgccacgt
ttccctgtgccagagggtgagacggaagcaacgtggtttgaaaaagaagttgccgctggt
ctagctcgtcgattccccaacggtgtctccgatgctcataaggcacaagccaaatatgaa
gttgatgtcatcattcagatgggtttccccggctacttcctcgtcgtcgctgacttcatt
gcgtgggcacgccagcagggtattcgagttggccctggtcgtggttcagcagcgggttca
ctcgcgtcgtatgccatgggtatcaccgagttagatccgctccaccacggtttgattttt
gagcgcttcctgaaccccgaacgtgtttccatgcccgatgtcgatgttgacttcgatgat
cgtcgacgtggtgaagtaattcgctatgtcaccgagaaatatggcagtgaccgtgtcgca
cagattgtgacctacggcaccatcaaggccaagcaagctctcaaagactcatctcgcgta
ttgggaatgccctattcggtaggggagaagctcaccaaagcgatgcctccatccatcatg
ggtaaggacatcaccctgaccgaaatcatggatcctcaggcaccgcgatacaaagaggcg
gctgacttccgatcggttcttgaatctgatgttgatgcacagactgttttcaacacggca
caaggtatagaaaacctcaaacgtcaatggggtgttcacgccgctggtgtgatcatgtcg
gctgaaccattgatggatgtcattcccatcatgaaacgtgaagatgatggcgccatcatt
acccaattcgatcagccgccttgtgaatctcttggcttgctcaagatggacttcttgggc
ctgcgtaacctcacggttattcaagatgcccttgtcaatattcagaacaaccgtggcatc
acggttgagcctgaactgttagatcttgattctgacccagcaacctacgagcttctttcg
cgcggtgacactctcggtgttttccagcttgatggtggaccaatgcgcgcacttctgcgc
cagttgaagcccacaaacttcgaagatatctctgctgtgatcgctctgtatcgcccaggc
cctatgggtatgaactcacacaccaattacgcattacgaaaaaacggccttcaagagatt
gagcccattcaccccgagcttgaggaaccgctctctgaaatcctgggaacaacctacggt
ctcattgtgtatcaggagcaagtaatggcggttgctcaaaaggtcgcgggatttaccctg
ggtcaagcagatgttttacgtcgtgccatgggtaagaagaagaagtcagaactggataag
cagtttgctgactttgaagctggcatgctcgcaaatggatattcagcccccgcggtcaaa
attctctgggataccttgatgcccttcgctgactacgccttcaacaaggctcactctgct
ggatacggagttctgagctattggaccgcttatctcaaggcaaatttcccggctgaatat
atggcagctctcttgacatcagttggtgattccaaagacaaactaggtatttacctgtct
gaatgtcgacgaatggggctcaacgttttggccccagatgtgaatgaatcagacggtgtt
ttctccgcagttggtcaagatattcgcttcggtatgggtgctattcgcaacgtcggtttt
ggcgtcgttgaacacattaagtcagcccgtgcggaaaagggtcgctttgattctttccac
gacttcctcaaaaaggttcctgttcaagtcgcaaacaagaagacgctggagtcgctcatt
aaagctggcgcttttgatgcgatggggaatacacgacgtgcactcgtagagattcatgag
gatgcagtcgaatctgctgtgagtctcaagcgcaacgaagcccttggtcaagttgatctt
ttcggtgacatgtttgagttcactgaagagcactctcaagttcccgatcgacctgaattt
accaaacgtgacaagctcgcttttgaacgtgaaatgctgggtctctatgtctccgatcac
ccccttgctgggcttgaactccaattggctaagcatgcaacggtgactatcaacgacctc
actacaagtgacaccaccatggacggagacatcgtggttcttgccggcctcgtcacagag
gtccaaagacgtatcgcgaagaaatcaggcaatgcctacggcattatcaagctggaagat
ttcggcggcgagatggacattatgctgcttggtcgcacctatcaagagtttggtcccatg
ctcgaaacagacttagttttagcagttaagggccgggttaacgttcgcgatgatggactc
aacatccaagctatgagtatgttcgtcccagacgtcggtgctgttgtgggcgaacaaggt
ccgctgaacctggttttaccagaagtaagagcaacctcctcaaccattggagagctctcc
gaggtcctcaaacgtcaccctggtcaatctgaagtgcgattgcgacttacccgcggggca
actgcacgcatctttgaactccctgctcgcgtcaacgtgtcatcagatttgtatggagag
ctaaagtctctcctaggtccaggttgcctcggttag
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