Aurantimicrobium photophilum: AURMO_01616
Help
Entry
AURMO_01616 CDS
T05480
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
aum
Aurantimicrobium photophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
PP-binding
Hexapep
Hexapep_2
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AWR22199
UniProt:
A0A2Z3RZN4
LinkDB
All DBs
Position
1588815..1592789
Genome browser
AA seq
1324 aa
AA seq
DB search
MSETPSQSLEAQSVLSRLSSAPAPRTLIDIFREITNFNADETALDDGTTRLSYRDLTEQA
LAVAHQLHSYGVKRGNRVGVRIESGSVDLYIAILGILHAGAAYVPVDADDPDERARVVFS
EAEVNGVIATGGKFLQSEIPGGELSQVGQIDFDYRETLFPEEFAPRETDDAWIIFTSGST
GKPKGVAVSHRSAAAFVDAESRMFLQAEPINAQDRVLAGLSVAFDASCEEMWLAWGHGGC
LVPAPRSLVRSGSDLGPWLMANGITIVSTVPTLAAMWPEDALENIRLLIFGGEAFPLELA
EKLASSGREVWNTYGPTEATVVACGAQTTGIGPMRIGLPLDGWDLAVVNADGHRVTEGET
GELIIGGVGLARYLDEEKDAHVYAPFPTLGWDRAYRSGDMVRYEAEGLIFVGRVDDQVKV
GGRRIELGEIESALSALPNVTAGAVVVQTTQAGNKTLVGYISVNDVEAFSVSEALVTLRE
SLPAPLIPLLVPLAELPVRTSGKVDKAALPWPLATADLDELDFTEIERRVASEWAEVLGV
PVTDLNTHFFDIGGGSLAAAQLVGRLRTLYPSMTVADIYAHPRLGSMSDFIDVSTAGELV
PTGSFHKSPKVPQSPQLIQAVLSIPLFALAGLRWLFYALTASTLLGLLDVVDFLPSAPLA
ILIPGILLFGSPWGRMLLSVAISRTVLAGLRPGNYLRGGSAHLRLWFAEQAASHIGAVTL
AGAPWVTAYARALGARIGKGVTMHTLPPITGMLWVGAGASIEPEVDLTGYWIDGDVVRVG
EIRIGAHATIGARSTLAPGTRIGKFAEIAPGSSVFGKVPAGQLWSGSPAKREGKVKAWWP
QVAAKQSRAWSALFALSSGLYALFPLLSLLGGATLVLVALKQNQSVSDVLSIVAVGFIPA
TMLAGFIFTVLVLASVRFLSLTMREGIFPVHSWAGWQAWSVERILDLARTFLFPLYSSLF
TPIWLRLLGAKVGHNVEASTVLMLPKMTTIRDDVFLADDTMVAPYALGNGWMFIGPVEIG
KRAFIGNSGLAPAGRKVPKDALVAVLSSAPRKAKEGSSWLGSPPMRLRRLIAEGDRERTY
KPSIWLRIARSLWELTRFVPVLVTALIGFAVVCGILLADSLWGMWAAVLLCGPLLWAAGI
IAAAISTIAKWVLVGKIKPQEKPLWSSFIWRNEVADTFVEMVAAPWFANYMNGTLGLVWW
LRSLGAKIGGGVWCETYWLPEADLVTLGDGATVNRGTVLQTHLFHDRVMSMDTVSVEAGG
TLGPHSVILPAARIGAHSTVGPASLVMRGEAVPEGSRWSGNPIGPWREVTVRKYFSDTAS
VKTV
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaccccctctcagagccttgaagcacagtctgtgctctcccgtctgagtagt
gccccggctcctaggacactcatcgacatcttccgcgagatcaccaatttcaatgctgac
gaaacagctttggacgacgggactactcgtctgagctatcgagacttaactgaacaggct
ctggctgtggcccaccaactccattcctatggcgtgaagcggggaaatcgtgtgggagtg
cgcattgagtccggcagtgttgatttatacatcgcaattttgggaattctgcatgcgggt
gctgcctacgttcctgttgatgccgatgatcctgatgaacgtgcgcgggttgtcttttct
gaagcagaagtcaacggagttatcgctaccggcggtaagttccttcaatctgagataccc
ggaggggaactcagccaagttggccagattgattttgactaccgcgagaccctctttcct
gaagaatttgctccccgagaaaccgatgacgcgtggataatctttacgtctggttctacc
ggcaaacccaagggtgtggctgtctcccaccgctcagctgctgcttttgttgatgccgag
tctcggatgttcctccaagcagaacccatcaatgcccaagatcgagtgctcgctggtctc
tccgttgcgtttgatgcctcctgtgaagagatgtggcttgcctggggccacggaggctgt
ctcgttccagcccctcgttcattggtcagatcaggttctgaccttggaccatggcttatg
gctaatggcatcaccattgtctcgactgtgcctaccctggctgcgatgtggcccgaggat
gccctcgagaacattcgcttgctaatttttggcggtgaagccttccctctcgagttggca
gaaaagttggcttcttccggccgagaagtctggaacacctacggccccaccgaggcaacc
gtggttgcctgcggagctcagaccacaggcatcgggccgatgagaattggcctccccctg
gacgggtgggacctcgctgtggtgaacgccgatgggcatcgtgttacagaaggcgaaacc
ggtgagctgatcatcggcggagtggggcttgcgagatacctcgacgaagagaaggacgcc
cacgtttatgcgcccttccccacattggggtgggatcgtgcttatcgcagcggcgacatg
gttcgctatgaagctgaaggactgatctttgtcggtcgcgttgatgaccaagttaaggtc
ggtggccgccgaattgaattgggtgaaattgaaagtgctttgagcgctctcccgaatgtc
accgcaggagctgtggttgtgcagacaacacaagcaggcaacaagactcttgtcggctat
atcagtgtcaatgacgttgaggctttctctgtttcagaagcgctggtgaccttgcgtgaa
tctctcccagcgcctctcattccactactggttcctcttgctgaacttcctgtcaggact
tccggcaaagtcgataaggcggctcttccctggccgctcgctaccgccgaccttgacgaa
ctcgatttcacagagatcgagcgacgcgtcgccagcgagtgggctgaggttctcggtgtt
cccgtgacggacctcaacactcacttctttgatattggtggtggttctttggccgctgcc
caacttgttggcaggctccgcaccctgtaccccagcatgacggtcgcagatatctacgcc
caccctcggttgggatccatgtctgacttcattgatgtcagcacagcaggagaacttgtt
cccaccgggtcgtttcacaaatctccaaaagttcctcagtctccccagctcatccaggca
gtgctctccatccccttatttgccttggcgggactgcgttggctgttttatgccctgact
gcatctacgttgttgggcttgctggacgttgttgactttctaccgtctgctccgcttgcc
attttgattccaggcatcttgttgtttggctccccgtggggtcgaatgttgctgagcgtt
gcgatttccagaacagttctcgctgggttgcgacccggtaattatctccgtggtggctcc
gcccatttgcgcttgtggttcgcggaacaggcagcttcacatatcggtgcggtgacattg
gctggtgcgccctgggtcacggcgtatgcacgggcactgggtgcacgaattggtaagggt
gtcaccatgcacaccctcccacccatcactgggatgctctgggttggtgcaggtgcatcg
attgaaccagaggtcgatcttacgggttattggatcgacggcgatgttgttcgggtgggt
gaaatccgcattggcgctcacgcaaccattggcgcacgcagcaccctcgccccgggaact
cgtattggcaagtttgctgaaattgctcctggctcgagcgtgttcggtaaggttccggca
gggcagctctggagcggatcacctgctaagcgagaaggcaaggtcaaggcgtggtggcct
caagtagccgccaagcagtcacgagcctggagtgcgctctttgcgttatcttctggcctc
tatgccctcttcccgctgctgtccttgctgggaggtgcgaccttagtgttggttgcattg
aaacagaatcagtctgtctctgacgtactgagcattgtcgcggtgggattcatccctgcg
acaatgctcgccggattcatcttcacagttctcgttcttgcctctgttcgcttcctcagc
ctcacgatgagggaaggcatcttcccggttcacagctgggccgggtggcaagcatggagt
gttgagagaatcctcgatttggcccgcacattcctctttcctctctactcgagtctgttc
acacccatttggcttcgcctgctgggagccaaggtaggacacaacgtcgaagcatcaact
gtgttgatgcttcccaagatgaccaccatcagagacgacgtcttcttagctgatgacacc
atggttgccccctacgcactgggtaacggttggatgttcattgggccggtagagattggt
aagcgcgcattcatcggcaactctggcttggcaccagcagggcgcaaggttcccaaagat
gccctggtagctgtcctttcgagtgctcctcgaaaggcgaaagaaggatcgtcctggttg
ggttctccgcccatgcgcttgcgcagactgatcgctgagggagaccgcgagcgcacctat
aaaccttcaatctggctgcggattgcccgtagtttgtgggagctgaccaggtttgtaccc
gtgcttgttaccgccctgattggtttcgcagtggtgtgtggcatattgcttgcggattcc
ctgtggggaatgtgggctgccgtcctactctgtggtcccttgttgtgggcagccggaatc
atcgcagctgccatcagcaccattgcaaagtgggttcttgtgggcaaaattaagccccaa
gaaaagccactgtggtcttcctttatttggcgcaacgaagtggccgacaccttcgtcgaa
atggtagccgcaccctggttcgccaactacatgaatggcacgctcggacttgtctggtgg
ctgcgcagtttgggcgcaaaaattggtggcggggtctggtgtgaaacgtattggcttcct
gaagcggatttggtcaccctcggtgacggcgccaccgtcaacagaggcactgttctgcaa
acacatctgttccatgacagagtgatgagtatggacacggtatcggtggaagcgggcgga
accctcggcccgcacagcgtgatacttcctgccgcacgtattggtgcccacagcactgtt
ggtccggcttctctcgtcatgcgtggtgaagctgttccagagggaagccgctggagcggg
aacccgatcgggccgtggcgtgaagttactgtgcggaagtacttttcagacacagcttct
gtgaagacggtgtga
DBGET
integrated database retrieval system
