Aerococcus urinae: AWM73_02400
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Entry
AWM73_02400 CDS
T04528
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
aun
Aerococcus urinae
Brite
KEGG Orthology (KO) [BR:
aun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aun03019
]
AWM73_02400
03009 Ribosome biogenesis [BR:
aun03009
]
AWM73_02400
Enzymes [BR:
aun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWM73_02400
Messenger RNA biogenesis [BR:
aun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM73_02400
Ribosome biogenesis [BR:
aun03009
]
Prokaryotic type
rRNA helicases
AWM73_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Cas3-like_C_2
PhoH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMB95443
LinkDB
All DBs
Position
545135..546484
Genome browser
AA seq
449 aa
AA seq
DB search
MSFKEYQFQPFIEAALEKLAFKEPTPIQKKVIPVIQAGKSLVAQSQTGSGKSHAFLLPLI
DQLKPANYTQLVITAPSRELADQLYQTAQQLVSESDVDFHIERAYGGTDTKRQKERLENQ
DPQVVIGTPGRLLDLVTEGSINVHKVEHFVVDEADMTLDMGFLHTVDQIASRMPDDLKIY
VFSATIPEKLRPFLRKYLEHPEWIQVANEKLISPTITNILLPLRGRSKDDLLKQALTMGE
PYLVLIFANTIEEVDQLYLKLKQWGLSVAKLHGDLDSRERRRVMRQIQHLDYQYVVATDL
AARGIDIEGVSHVVNYDIPKELEFFIHRVGRTGRQGMKGIALTFYHPDQEKAIGWLEDRG
IHFEVKDIKNGQWVEVKDHKERQLRKGRHQEEADHVIRGMINRNKKRKVKPGYKKKLDRQ
IKSYKRDKYNKKQRQVARQKRKQNKENNR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagaataccagttccagccttttattgaggcggccttagagaaattagcc
tttaaagaacctaccccgattcaaaagaaagtcattcccgttattcaagcaggaaaaagc
ctagttgcccaaagtcaaacaggatcaggcaagtcccatgccttcttgcttcccttaatc
gaccaattaaaaccggctaattatacccaattagtcattacagcaccgagccgggaatta
gccgaccaattgtatcaaaccgcccaacagctggttagtgaaagtgatgtagattttcat
attgaaagagcctatggggggactgacaccaagcggcaaaaagaacgcctagaaaaccaa
gatccccaagtggtgattggaactcccggtcgcttattagacctagtgactgagggatcg
atcaatgtccataaagtggaacactttgtggtggatgaggctgatatgactttggatatg
ggctttttgcatacggtggaccaaatcgccagtcggatgccagatgatttgaagatttac
gtcttttccgccaccatcccggagaaattacgtcccttccttagaaagtacttggaacat
ccggaatggatccaagtggccaacgaaaagctgatttctccaaccattaccaatatctta
ctccccttaagagggcggtccaaagatgatctgctcaagcaagccttaaccatgggtgaa
ccttacttggttcttatctttgctaataccatcgaggaagtggaccaactctatttaaaa
ctcaagcaatgggggctatcggtagctaagttgcacggtgacctggatagtcgcgaacgg
cggcgggtcatgcgtcaaatccaacaccttgattatcaatatgtggtggctacggattta
gctgcccgtgggattgatattgaaggagtttcccatgtggttaactatgatattcctaaa
gagttagaattctttatccaccgggtaggccgtacgggacggcaaggaatgaagggcatt
gccttgaccttctaccatcctgaccaagaaaaagcgattggctggttagaagatcgtggg
atccactttgaggtgaaagacattaaaaacggtcaatgggttgaagttaaagaccataag
gaacggcagttaagaaaaggccgccaccaagaggaagctgaccatgtcattaggggaatg
ataaaccgcaataagaagagaaaagttaaacccggttataagaaaaaacttgaccgtcaa
attaaatcttataaacgagataaatataataaaaaacaaaggcaagtcgctcgacaaaaa
cgcaagcaaaataaagaaaacaaccgttaa
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