Aerococcus urinae: AWM73_03230
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Entry
AWM73_03230 CDS
T04528
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aun
Aerococcus urinae
Pathway
aun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM73_03230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aun03019
]
AWM73_03230
03400 DNA repair and recombination proteins [BR:
aun03400
]
AWM73_03230
Enzymes [BR:
aun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWM73_03230
Messenger RNA biogenesis [BR:
aun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM73_03230
DNA repair and recombination proteins [BR:
aun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWM73_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
SNF2-rel_dom
Pesticin
AAA_14
TniB
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AMB95598
UniProt:
A0A0X8FE00
LinkDB
All DBs
Position
714520..715998
Genome browser
AA seq
492 aa
AA seq
DB search
MLEDLLATHFGYQSFRPGQKEILLHLQKRENVIGILPTAGGKSLIYQIYQYLNPGPILLI
SPLLALMEDQVSQLQALGFKASVAITSQLSKQEKNWLLNHLHDFQFIIMSPEMLSQPAVL
RRLKQIAIKLMVIDEAHCISQWGYDFRLEYSALKQFRQALNHPLTLALSGSASQNTVTEI
AQHLFDERESYQQVQCSLDRPNLFYGQLKLNEKDKFHHLNSLLETLPKPGIIYVHNKMEL
EELYQDLKASGQLKLASYHADKTSEERLQVQEQFQKGYLDAILATSAFGMGINQANVRFV
IHYHAPQSLADYLQESGRCGRDGQEALVLLYSNPQEISRLNYFKEQIDAQASPFYHGLNQ
AYQRADFLQSQTFLAFEEQIQNLITYFYYNYSPKDKEQIQRDFQSYQRIKKNEIEQMVQY
LNLNSCYRRYLLSHFSKERISTNGFCCSHCQADFEDTATFKEYLTLAPKRLVNPKEKVLK
DWRARLNVLFPS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagatctcttagcgactcactttggttaccagtcttttcgccccgggcaaaag
gaaattttacttcatttacaaaagcgagaaaatgtgataggtattttacccactgctggc
ggcaagtcattgatttatcagatctaccagtatttaaatcccggacctattttgcttatc
tcccctttgctggcattgatggaagaccaggtcagtcagctgcaggcacttggttttaaa
gcaagtgtggcaataactagtcaattaagtaaacaagaaaaaaactggttacttaatcat
ctccatgactttcaatttattattatgtcaccggaaatgctttcccaacccgctgtctta
cggcgcttaaagcaaattgctatcaaactgatggtcattgatgaagcgcactgtatttct
caatggggctatgattttcggctggagtacagtgccctcaaacaatttcgccaagcccta
aatcatcctttgaccttagccctgagcggtagcgctagtcaaaatacagtaacagagatt
gcccagcatttgtttgatgagcgtgaaagctatcagcaagtccaatgctccttagaccgg
cccaatttgttctatggtcaattgaagcttaatgaaaaggacaagtttcaccatcttaat
tccttgcttgagaccttaccgaagccgggaatcatttatgtccacaataaaatggagttg
gaagaactttaccaagatttaaaagcgagcggccagctaaagctcgccagctaccatgct
gacaagactagtgaggagcgcttgcaagtccaagagcaatttcaaaagggatatcttgac
gcgattttagccacatctgcttttggcatggggattaaccaggccaatgtacgttttgtt
attcactatcatgctccgcaatcattagctgactatctgcaagagagtggccgatgtggt
cgtgacggccaagaagctttggtattactttattctaatccccaagaaattagccgttta
aattattttaaagagcaaattgacgctcaagcttcgcctttttatcatggtttaaatcag
gcttatcagcgggctgattttttgcaaagtcagactttcttagcatttgaggagcaaatc
caaaatttaatcacctatttttactataattattcgcccaaggataaggagcagattcag
cgtgactttcaaagctatcaaaggataaagaaaaatgaaatcgaacaaatggttcaatac
ctcaacctaaatagctgttaccgccgttacttactaagccatttttccaaggaaaggata
agtactaatggcttttgttgctcgcattgtcaggctgactttgaagatacggcaactttt
aaggaatatctgaccttggcccctaagcgcttagtgaatcccaaagaaaaagtgttgaag
gattggcgggcacgacttaatgtcttatttcctagttaa
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