Aerococcus urinae: AWM73_04935
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Entry
AWM73_04935 CDS
T04528
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aun
Aerococcus urinae
Pathway
aun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWM73_04935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aun03400
]
AWM73_04935
Enzymes [BR:
aun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AWM73_04935
DNA repair and recombination proteins [BR:
aun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWM73_04935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
DEAD
UvrD_C
UvrD-helicase
nSTAND3
T2SSE
AAA_12
AAA_28
HHH_5
NPHP3_N
CodY
AAA
AAA_29
AAA_25
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AMB95894
UniProt:
A0A0X8FEL0
LinkDB
All DBs
Position
complement(1060831..1063296)
Genome browser
AA seq
821 aa
AA seq
DB search
MTVTEDYFIGEVEATFFSNPDNYYRVMRITVDDTNTLYSEKNIVVTGNFGTIQDGTTYQF
FGNLVDHPKYGVQFKVSHYEGIKITSKDGLIKYLSSDDFPGIGKILAERVVNTLGEKTID
LIVNQPERLKEVKGLTKNKQQMLHEKVKANRGNEDTFIQLSEMGFSNHLAGKIYAKYQDE
AVELIKENPYSLVKNIQGFGFQKADLLAQRLDFAYDSPLRIQGAITFSLETICYSNGDTY
VKKEELFHQVLNLLNKSQMNLQMVDIQQVADSLSDLVDTNEVIATEEGYFLPSLYYAEKG
IVKRLKRIKNERTQPKYENDNLANEIEESEAKLGIQYGPAQRKAITEALEEKLFILTGGP
GTGKTTVLEGIIDIYCRLNNIRLGDYDPGDFPIRLAAPTGRAAKRMSETTGLVATTIHRL
IGLTGEEDENSIITSDKETIEGDLLIIDEMSMVDTWLFFQLLEAVPDDMQIILVGDKDQL
PSVGPGQVLSDLLRSQTIAWRELDEIFRQNANSTITLLAHDIKNGEMPADLTQNKADRSF
FRVDYFHLADFIAAVAKRALEKDYDVKDIQVLAPMYKGQAGIDQINQKLQESLNPNSDGN
KRQLSHFNRLFRLGDKVLQLQNHAEMNVFNGDMGEIVAIFYAKETTSQSDEIVVDFDGNE
VTYSRQDFNQLTLAYCVSIHKSQGSEFPIVILPLISQYQRMLQRNLLYTAITRAKQSLIL
CGEVQAFQSAIQTQASQRHTNLYRALLEEDELLPKLSSPSSEESLSQDQSTLTQEDESED
QQDKLGNSEIDVKVDWLTSALLESGQIDPLIGMDGISPYDF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaacggaagattatttcatcggcgaagttgaggctacctttttttctaatcca
gataattattatcgggtgatgcggattacggttgatgataccaacaccctttactccgaa
aaaaatattgtggtgacgggaaattttgggactatacaggacggaaccacttatcaattc
tttggtaacttggttgaccaccctaagtacggagtacaattcaaagtctcccattatgaa
ggaataaaaattaccagtaaagatggattaatcaaatatttatccagtgatgattttcct
ggaattgggaaaatactggctgaacgtgtggtcaataccttaggtgagaagactattgac
ttaatcgtcaatcaacccgaacgtttgaaagaagttaagggcctgacgaaaaataaacag
caaatgctacatgagaaagtaaaggctaatcgtggcaatgaggataccttcattcaatta
tcggagatgggtttttccaaccatttagcagggaagatctatgctaaataccaagatgaa
gcggttgaattgattaaagaaaatccctattcactggttaaaaatattcagggttttggt
tttcaaaaggctgatttactggcccaacgtttagactttgcctatgactcgcctttacgc
atccaaggggcgattactttttcattagaaacaatttgttatagcaatggggatacttat
gttaagaaggaagaactatttcaccaggttctcaatctattaaataaaagccaaatgaat
ctacaaatggttgacatccagcaagtggctgatagcttgagcgacttggtagatactaat
gaagtgattgcgactgaagagggttattttcttcctagtctctattatgcagagaagggg
attgttaaacgtttaaaacgtatcaagaatgaacgaactcagcctaaatatgagaatgat
aatttggctaatgaaatagaggaaagcgaagcaaaattaggtattcaatacggaccagct
caaaggaaggcaattaccgaagccctagaagagaaattatttattcttaccgggggaccg
ggtacgggaaaaaccacggttttagaaggaatcattgatatttattgccggttaaataat
atccgcctaggggattatgacccgggtgacttccctattcgtttggcagccccaaccgga
cgcgctgccaagcggatgagtgagactactggcctagtagcaaccactatccaccgttta
attgggctcaccggtgaagaagatgaaaatagcatcataacttcggataaagagactatt
gaaggggacttactgatcattgatgaaatgtccatggtagatacctggttattctttcag
ttattagaagcggttcctgatgatatgcaaattatactggtgggggataaagatcaactg
ccctcagttggtccgggacaagtactgtctgatctcttgagaagtcaaacaatcgcttgg
cgtgagctcgacgaaatatttcgtcaaaatgctaattcaactatcaccttattggctcat
gatattaaaaatggggaaatgcctgccgatcttacccaaaataaggctgaccggtcattt
tttcgggtggattatttccacttagctgattttatcgcagcggttgccaaacgtgccctc
gaaaaagactatgatgttaaagatattcaagttttggcccccatgtataagggtcaggct
ggaatcgatcagattaaccagaaactgcaggaaagtttaaatccaaatagtgatgggaat
aaacgccaacttagccactttaaccgtctcttccgcttaggcgataaggttttgcagctg
caaaatcatgctgaaatgaatgtctttaatggggatatgggagaaatcgtagcgatattt
tatgccaaggaaacgaccagccaaagtgatgaaatagtggttgatttcgacggcaatgag
gtcacctatagtcggcaagattttaaccaattaaccctggcgtattgcgtctcaattcat
aaatcacagggaagcgaatttcctatcgttatcctccccttaatcagccaataccaacgc
atgctgcaacgcaatttgctctatacagcgatcaccagagctaagcaatccttaattctc
tgtggggaagtccaagcctttcaatctgctattcaaacccaggccagtcaacgacatact
aatctttatcgcgccttacttgaagaagatgaattactgcctaaactatcctcgccttca
agtgaagagagccttagtcaggatcaaagcactctgacccaagaagacgagtcagaagac
cagcaagataagctgggtaactcagaaattgatgtaaaagtcgattggttaacctctgcc
ttacttgaaagtggtcagattgatcctttaattggtatggatggcatcagtccttatgat
ttttaa
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