Aerococcus urinae: AWM73_07240
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Entry
AWM73_07240 CDS
T04528
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aun
Aerococcus urinae
Pathway
aun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM73_07240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aun03021
]
AWM73_07240
03019 Messenger RNA biogenesis [BR:
aun03019
]
AWM73_07240
Transcription machinery [BR:
aun03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AWM73_07240
Messenger RNA biogenesis [BR:
aun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AWM73_07240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
Mug135_C
ATPase_2
NACHT
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AMB96307
UniProt:
A0A0X8FGV7
LinkDB
All DBs
Position
complement(1586234..1587535)
Genome browser
AA seq
433 aa
AA seq
DB search
MTKKKAKFEKDELLTWEDLEGLTLKQIYDYAKEYKIPYYSQMNKKELILAVIRAQEKSQG
YFSVEGILDITGNEFGFLRPINYSPSQEDIYISNSQMRRFGLRNGDLVSGTARPPKNNER
YLGLMHVYGVNGKDPEEAKQRSHFPALTPIYPDQALRLESAPKRLSTRMIDLIAPVGFGQ
RGLIAAPPKAGKTVLLKEIANGISENYPEAELIILLIDERPEEVTDLERSVQGEVVSSTF
DQKPDNHVRVAELVLERARRLVEDKRDVIVLMDSITRLARAYNLIEPPSGRTLSGGLDPA
ALYGPKRFFGSARNIEDGGSLTILATALTDTGSRMDDMIYEEFKGTGNMELHLSRQLAER
RIFPAIDIKKSGTRKEELLLSDQALEALWQLRQGMQGNSQEYTESFIHELSQTQTNQQFI
ERLASFGQALKEK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaagaaagcaaaatttgaaaaagatgagctcttaacctgggaagatctggaa
ggcctcaccctcaagcaaatctatgactacgccaaggaatataagattccttactacagt
caaatgaataaaaaggaactgattctagccgttatccgggcccaagaaaaaagccagggc
tatttttcagtggagggcattctggatattaccggtaacgaatttggtttcttgcgcccg
attaactattcccccagccaagaagacatttatatttctaattcccagatgcgccgcttt
ggcttacggaatggggatttggtttcagggacagcccggccgcctaagaacaatgaacgc
tatctaggcttgatgcatgtctatggggttaacggcaaggatcctgaagaagctaaacag
cgctcgcattttccagccttaacgcctatctatcctgaccaggccttgcgtttggagtca
gcgcctaagcgcctatctacccggatgattgacctcatcgccccagtcggtttcggccaa
aggggcttaattgcggcccctcccaaggcaggcaagacggttctcttaaaagaaatcgcc
aatgggattagtgaaaactatcctgaggccgaattaattattctcttaatcgatgaacgt
cctgaggaagtgactgacctcgagcgcagtgtccaaggggaagtggtcagctcgaccttt
gaccaaaaacctgataaccatgtccgggtagcggaattggtcttggaacgggcccggcgt
ttggtcgaagataagcgggatgtcatcgtcttgatggattctattacccgtctggcccgg
gcatataacttgattgagccgccttccggtcggaccctatccggaggtctggacccggct
gccttatacggccccaagcgcttcttcggttccgccagaaatattgaagatggtggatct
ttgaccatcctagcgacggccttaaccgataccgggtccaggatggatgacatgatttat
gaagaatttaagggcaccggcaatatggaattacacttgtcccggcaactggccgagcgg
cggattttcccagctattgatattaagaaatccggcacccgcaaggaagaactgctctta
agtgaccaagccctagaagctctctggcaactccgtcaaggcatgcagggcaatagccaa
gagtataccgagagcttcatccatgagttatcgcaaacccagactaaccaacaatttatc
gaacgcttagcatcttttggtcaagccttgaaagaaaaataa
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