Actinomyces urogenitalis: R3I39_03425
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Entry
R3I39_03425 CDS
T09523
Name
(GenBank) Rib/alpha-like domain-containing protein
Organism
auo
Actinomyces urogenitalis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RibLong
TSP3_bac
Rib
Motif
Other DBs
NCBI-ProteinID:
WOO95853
LinkDB
All DBs
Position
808672..813474
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AA seq
1600 aa
AA seq
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MRSSLDVPRKSVLLTRRSKTAAAMGAVALVLGVGAGVAVPVLTSLSPAAVAAVTPGNSVA
PEIDGVNVIESGTTDKNAQHSVNGKVVLQTSGHGGEIDNTAVATPLENVRVYAQWYEKDG
SASPIYTGTTAADGTYSIVMKDFVKYDGTTVSFDADPNLPEGEKWRVWAKTPEGTYLWYS
WEESQLGPQSSIMDTAFGAGNLVGPDRLTGFNFIYAPKTDAVMHDMAHAREAKAVSGEQG
YISGEVYWNNRANPGATTMDMVTARDSGDTAARHIKVVGSYLSDYALTRIYADGPAAIGT
KDIRGLGWNDSKEAALQAWIKEQIKAEGVDKWIAETVTTTTDDNGQYRLQFNGTYGKAYN
DRGYNDGALLASNLYSDALLPDNVATAEGMTPGKAKYSDLFNRVASSPEVGSWYRNETDK
KARSIDKTPKHVNFDWAYVSLEGVDRYSVTTPYYGNKFAFDDAGTSWTGFIYNNTTAPGA
SMQNIVRAKFALSLDELSFDVTPYDSFGNFASSGDTVKTVTTGLPSADLGNNRYQIAWFD
PEGKEVKACNIAIPDNTGTLASCDFEAPNVKEATTYTARLYAIDTEGERGSYPMSQDAFT
VLPKTTDYDPVYKDDTKVVQGSSTTIPVPTFDDPRTKDVVETNATPKDTTFEQDGTDVTL
PDGTKGAFPGTIVVNDDGSIKVTPNADASLGSYQVPVKVTYVDGSTDTVSVPFEVTERLT
NADENDPSYEGVSVTKGESVTSESPKNSDGSEVPSGSEFSIPADFKAPEGTTVSVDKTTG
KVTVKTSDGTPVGEIKVPVTVTYPDKTTDSTSVTVTVKDAATQPSDADENDPSYEGVSVT
KGESVTSESPKNSDGSEVPSGSEFSIPADFKAPEGTTVSVDKTTGKVTVKTSDGTPVGEI
KVPVTVTYPDKTTDSTSVTVTVKDAATQPSDADENDPSYEGVSVTKGESVTSESPKNSDG
SEVPSGSEFSIPADFKAPEGTTVSVDKTTGKVTVKTSDGTPVGEIKVPVTVTYPDKTTDS
TSVTVTVKDAATQPTVDPKPVYADTVVPAGKTTTVTPTNEGDAYPSGTVFAIDPSFQAPG
GYTITIDPATGTLSVTVAPAGKDGADAESVTVPVVVTYPDGSNATNDSVNAVIKLDTDGD
GQPDVTDPDDDNDGVSDEDEAKNGTDPKNPDTDGDGLNDGDEKTHGTDPKNPDTDGDGVN
DGDEVTGDKNKDWDGDGKGDPTDPTKADSDGDGLNDGDEITRGTDPNKADTDGDGVNDGD
EVTGDKNKDWDGDGKGDPTDPTKADSDGDGLNDGDEITRGTDPNKADTDGDGVNDGDEVT
GDKNKDWDGDGKGDPTDPTKADSDGDGLNDGDEITRGTDPNKADTDGDGVNDGDEVTGDK
NKDWDGDGKGDPTDPTKADSDGDGLNDGDEITRGTDPNKADTDGDGVNDGDEVTGDKNKD
WDGDGKGDPTDPTKADSDGDGLNDGDEITRGTDPNKADTDGDGISDGNEVSGKDNPFQDG
KHDPNGEPGNTDPLNPDTDGDGISDGDEVKNGTDPLVPNAGGKPSTQPADQGSQKFSGKT
ASVKKSLAKTGAAVGLTAVVAAGLAGLGGLLVRRRRTDED
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgagatcttccctcgacgtgccccgcaagtcggtgcttctcacgcgacgttcgaagact
gcggctgccatgggcgccgttgcgctcgttcttggtgttggagccggtgtggcggtgcct
gtactgactagcctgtctccggctgctgtcgctgcagtcacgcctggtaactcggtggcg
cccgagattgacggagtcaacgtcatcgagagcggcacgaccgacaagaatgctcagcac
agcgtcaacggaaaagttgtcctccagacctcgggtcatggcggtgagatcgacaatacg
gccgttgcgaccccgctggagaatgtacgtgtctatgcccagtggtacgagaaggacggt
tcggcctccccgatctacaccggcacaacggcggctgacggcacctacagcatcgtcatg
aaggacttcgtcaagtatgacggcacgacggtctcgttcgacgcggacccgaacttgcct
gagggggagaagtggcgcgtatgggcaaagacgccggaggggacgtatctctggtacagc
tgggaggaaagccagcttggtccgcagtcgtccattatggataccgctttcggagcggga
aacctggtgggacctgaccggctcaccggcttcaacttcatctatgcccccaagaccgac
gccgtcatgcatgacatggcccacgctcgcgaggcgaaggctgtcagtggtgagcagggc
tacatcagcggtgaggtctattggaacaatcgcgccaatccgggtgcgacaaccatggac
atggtgacggcacgcgatagcggtgataccgcggctcgtcacattaaggttgtcgggtcg
tacctctcggactacgcgctcacgcggatctacgccgacggcccggctgcgattggcacc
aaagacattcgtggacttggctggaacgacagcaaggaagcggctctgcaggcctggatc
aaggagcagatcaaggctgagggcgtggacaagtggattgctgagacggtcaccacgact
actgacgataacggccagtaccgtcttcagttcaatggcacctacggcaaggcatataac
gaccgtgggtacaacgacggcgctctacttgcttctaacctctactcggacgcgctgctt
cctgacaatgtcgctactgccgaggggatgactcctggcaaggcaaagtattctgatctc
ttcaaccgtgttgcctcgagccctgaggtcggttcgtggtacaggaacgagactgacaag
aaagcgaggagcatcgacaagactccgaagcatgtcaacttcgactgggcttatgtctct
cttgagggtgttgacaggtacagcgtgacgactccgtactacggaaacaagttcgcgttc
gatgacgctggcacgagttggactggcttcatctacaacaacaccaccgcgcctggtgcg
tcgatgcagaacattgttcgtgcgaagttcgccttgtctctcgacgagctgtcctttgat
gtgacgccttatgactccttcgggaacttcgcctcctcgggggacacagtcaagacggtc
acgacgggactaccgagcgctgatcttggtaacaaccgctaccagatcgcctggtttgac
cctgagggtaaggaagtcaaagcctgcaatatagcgattcctgacaacaccgggactctc
gcgtcctgtgactttgaggctccgaacgtgaaggaagcgaccacgtacacggcgcgcctc
tacgctatcgatacggaaggcgagcgcggcagctacccgatgtctcaggacgccttcact
gtcctcccgaagactactgattacgacccggtctacaaggatgacaccaaggttgtgcag
ggaagctcgaccaccatcccggtgccaacctttgacgaccctcgcaccaaggacgtcgtt
gagaccaatgccactccgaaggacaccaccttcgagcaggatggcacggatgtcaccctt
cctgacggcacgaagggtgccttcccgggcaccatcgtcgtcaacgacgatggatccatc
aaggtgaccccaaacgcggacgcttcgttgggctcctaccaggtcccggtcaaggtgact
tacgtggatggctcgactgacacggtctctgtccccttcgaggtgaccgagaggctcacg
aatgcggatgagaatgatccgtcgtatgagggggtgtcggtgactaagggtgagtcggtg
acgtctgagtcgccgaagaactctgacggttcggaggttccgtctggttcagagttctcg
atcccggcggacttcaaggctcctgagggtacgacggtgtcggtggacaagaccaccggc
aaggtgactgtgaagacgagtgacggtactcctgtgggtgagatcaaggtcccggtgacg
gtgacttacccggacaagaccacggactcgacctcggtgacggttaccgtcaaggacgct
gcgacccagccgtctgacgcggatgagaatgatccgtcgtatgagggggtgtcggtgact
aagggtgagtcggtgacgtctgagtcgccgaagaactctgacggttcggaggttccgtct
ggttcagagttctcgatcccggcggacttcaaggctcctgagggtacgacggtgtcggtg
gacaagaccaccggcaaggtgactgtgaagacgagtgacggtactcctgtgggtgagatc
aaggtcccggtgacggtgacttacccggacaagaccacggactcgacctcggtgacggtt
accgtcaaggacgctgcgacccagccgtctgacgcggatgagaatgatccgtcgtatgag
ggggtgtcggtgactaagggtgagtcggtgacgtctgagtcgccgaagaactctgacggt
tcggaggttccgtctggttcagagttctcgatcccggcggacttcaaggctcctgagggt
acgacggtgtcggtggacaagaccaccggcaaggtgactgtgaagacgagtgacggtact
cctgtgggtgagatcaaggtcccggtgacggtgacttacccggacaagaccacggactcg
acctcggtgacggttaccgtcaaggacgctgcgacccagccgacggtcgacccgaagccg
gtttacgccgacaccgttgtccccgcagggaaaaccaccacggtcacgccgaccaacgag
ggcgacgcctacccaagcggcacggtcttcgcgatcgacccgagcttccaggctcctggg
ggctacaccattacgatcgacccggctactggcaccctctcggtgaccgtcgccccggcc
ggcaaggacggcgcggacgccgagtccgtcactgtccctgtcgtcgtcacctaccccgac
gggtccaacgccaccaacgactccgtcaacgccgtgatcaagctcgacaccgacggcgac
ggccagccggacgtgacggaccccgacgacgacaacgacggtgtctctgacgaggatgag
gccaagaacggtaccgatccgaagaaccccgacactgacggcgacggtctgaacgacggt
gacgagaagacccacggcactgatccgaagaaccccgacaccgacggtgacggcgtcaac
gacggtgacgaggtcactggtgacaagaacaaggactgggacggtgacgggaagggtgac
ccgaccgatccgaccaaggccgactctgatggcgatggcctgaacgatggtgacgagatc
actcgcggcaccgacccgaacaaggccgacaccgacggtgacggcgtcaacgacggtgac
gaggtcactggtgacaagaacaaggactgggacggtgacgggaagggtgacccgaccgat
ccgaccaaggccgactctgatggcgatggcctgaacgatggtgacgagatcactcgcggc
accgacccgaacaaggccgacaccgacggtgacggcgtcaacgacggtgacgaggtcact
ggtgacaagaacaaggactgggacggtgacgggaagggtgacccgaccgatccgaccaag
gccgactctgatggcgatggcctgaacgatggtgacgagatcactcgcggcaccgacccg
aacaaggccgacaccgacggtgacggcgtcaacgacggtgacgaggtcactggtgacaag
aacaaggactgggacggtgacgggaagggtgacccgaccgatccgaccaaggccgactct
gatggcgatggcctgaacgatggtgacgagatcactcgcggcaccgacccgaacaaggcc
gacaccgacggtgacggcgtcaacgacggtgacgaggtcactggtgacaagaacaaggac
tgggacggtgacgggaagggtgacccgaccgatccgaccaaggccgactctgatggcgat
ggcctgaacgatggtgacgagatcactcgcggcaccgacccgaacaaggccgacaccgac
ggtgacggcatcagcgacggcaacgaggtctctggcaaggacaacccgttccaggacggc
aagcacgacccgaacggcgagcccggcaacactgacccgctcaaccccgacactgacggc
gatggcatcagcgacggcgacgaggtcaagaacgggactgacccgcttgtgccgaacgcg
ggtggcaagccctccacgcagccggctgaccagggatctcagaagttttctggcaagacg
gcctcggtgaagaagtcgctggcgaagactggtgctgctgtgggtctgactgctgtggtg
gccgctggtctggctggtctgggtggcctcctggtgcgtcgtcgtcgcactgatgaggac
tga
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