Actinomyces urogenitalis: R3I39_04685
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Entry
R3I39_04685 CDS
T09523
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
auo
Actinomyces urogenitalis
Pathway
auo00521
Streptomycin biosynthesis
auo00523
Polyketide sugar unit biosynthesis
auo00525
Acarbose and validamycin biosynthesis
auo00541
Biosynthesis of various nucleotide sugars
auo01100
Metabolic pathways
auo01110
Biosynthesis of secondary metabolites
auo01250
Biosynthesis of nucleotide sugars
Module
auo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R3I39_04685 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R3I39_04685 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
R3I39_04685 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R3I39_04685 (rfbB)
00525 Acarbose and validamycin biosynthesis
R3I39_04685 (rfbB)
Enzymes [BR:
auo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
R3I39_04685 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
adh_short
KR
NmrA
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
WOO96068
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All DBs
Position
complement(1112297..1113292)
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AA seq
331 aa
AA seq
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MNVLITGGAGFIGANFVHQTLVRHPDAKVTVLDKLTYAGNKGSLADLGERVTLVVGDIAD
ADTVDPLVAEADVVVHFAAESHNDNSLLDPSPFIRTNLVGTFTLLEAVRRHKVRFHHIST
DEVYGDLELDDPAKFEPTTPYNPSSPYSSSKAGSDLLVRAWVRSFGVEATISNCSNNYGP
YQHIEKFIPRQITNLIDGVKPKLYGAGENVRDWIHVLDHNDAVWDIIEKGRIGETYLIGA
NGEKNNKEVVELILELMGYDKDDYEHVNDRPGHDMRYAIDNSKLVEELGWSPKYTDFRSG
LQATIDWYTTNEAWWRPLKAEVEAKYAAQGQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcctcatcaccggaggtgccggcttcatcggtgccaactttgtccaccagacc
ctcgtacgtcacccagacgccaaggtcacggtcctggacaagctcacctacgccggcaac
aagggatccctggcggacctgggcgagcgcgtcaccctcgtcgtcggcgacatcgccgac
gctgacaccgtcgacccgctggtcgccgaggcggacgtcgtggtccacttcgccgccgag
tcccacaacgacaactcgctactggacccctcccccttcatccgtaccaacctggtcggc
accttcaccctgctggaggcagtacgccgccacaaggtgcgcttccaccacatctccacc
gacgaggtctacggagacctcgagctagacgacccggccaagttcgagccgaccacgccc
tacaacccctcctccccctactcctcctccaaggcaggctcggacctgctcgtacgcgcc
tgggtccgctccttcggcgtggaggccaccatctccaactgctcgaacaactacggcccc
taccagcacatcgagaagttcatcccccgccagatcaccaacctcatcgacggagtcaag
cccaagctctacggagccggtgagaacgtccgcgactggatccacgtcctggaccacaac
gacgccgtgtgggacatcatcgagaagggccgcatcggcgagacctacctcatcggcgcc
aacggcgagaagaacaacaaggaggtcgtcgagctcatcctcgagctcatgggctacgac
aaggacgactacgagcacgtcaacgaccgccccggccacgacatgcgctacgccatcgac
aactccaagctcgtcgaggagctcggctggtcaccgaagtacaccgacttccgctccggc
ctccaggccaccatcgactggtacaccaccaacgaggcctggtggcgccccctcaaggcc
gaggtcgaagccaagtacgccgcacagggacagtaa
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