Actinomyces urogenitalis: R3I39_04950
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Entry
R3I39_04950 CDS
T09523
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
auo
Actinomyces urogenitalis
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auo03400
]
R3I39_04950
DNA repair and recombination proteins [BR:
auo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R3I39_04950
Archaeal homologous recombinant proteins
R3I39_04950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
AAA_19
NTPase_1
AAA
nSTAND3
PRT_C
Motif
Other DBs
NCBI-ProteinID:
WOO96120
LinkDB
All DBs
Position
complement(1176494..1179685)
Genome browser
AA seq
1063 aa
AA seq
DB search
MTAVGPYPGTEVIDFDRFAASGRFLLTGPTGAGKTTIIDAIVFALYGDVAGDKDSSKDRI
RSRLAGPGTETVVELVFSTSAGTYRVRRTPAYERLKLRGSGTTTQKASLKVWRLTDPAGR
PSQDAALRPDEAGAELLRAIGLSREQFTQTIVLPQGKFATFLRASSDERHKLLRDVFGTR
VYDELQEELRRRSLAARGQVEQSHQRLLAAAEAFAEVISPEEADQHSPERTASQQAGASE
ASPSPSAPEEAEALHPTAAERLRRAVEAATPGQEVIIEITSSVTGQTAARLREAQDEVAC
AQRRRETARGALDKAQALTELLAQRRALLQAHDELEAGAQDAALTARTLELAQRAASVAV
MVERARKDAEAASQVLTQEPGQQPQDEATTVLLAQALSECEQALGTVRDWDQVAHAPQPG
TALQLPASDRLLAHLEAQAREQRDQAAALAEAEATESQVSGRREHLDALRQEQERQSEQT
EQTRQALASLPQRGEQLRALLATAHQAQERLPDLRSAYEAAGRRAEAAEQAQPVSTALAQ
ARECAEQARKEADAVEKQAHALRSAWINATSASLVGELSPGQPCPVCGSSEHPRPASAVA
EPVSRADLDAADQSSARARQNLEAARAEVTALQARLTQLSAAAEGRSPEQAAAQLTAART
ALTGAQEEAEPRTRLQEELDSLTARESELRQQLSEHKEAAAATAATLASEQQALDRDLEQ
IATARGTYTTVASRRAELGRLAQVAEALTAHWRTIGALVQTSRSSQQDLAGEMTKAGFSS
RTGLEAARRSEAEVKHLSSLVRERDAEAARVRAGLARPEISMLTGQEEPGLEQARTVLAE
AEQAWQSAVSQHASVQAQAESVRTRARRLRQAAADLTTVVGDNAALLHVAALAAGENPEA
TPLATWVLTERFKDVLTFANHRLETMSGGRYELIQVDEEKNSARRRGLGMGVLDRLGGER
TRDPRTLSGGETFYVSLALALALADVVATESGGILMETLFVDEGFGSLDPQTLQDVLNEL
GQLQQGGRTVGIVSHVEELRRQIPDQVRVTATPEGSRLTVVAS
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgttggaccttatcccggcaccgaggtcatcgattttgaccgcttcgccgcc
tccgggcggttcctgctcacagggcctacgggcgccggcaagacgacgatcatcgacgcc
atcgtcttcgccctgtacggggacgtggccggggacaaggactcctccaaggaccgtatc
cgctcccgtctggccggtcccggcaccgagaccgtcgtcgagctggtcttctccacctcc
gccggcacctaccgtgtgcgccgcaccccggcctacgagaggctcaagctgcgcggcagc
ggaaccaccacgcaaaaggcctcgctcaaggtctggcggcttactgaccctgccggccgg
ccgagccaggacgctgctctgcgcccggatgaggccggagcggagctgctacgcgccatc
gggctgagccgtgagcaattcacccagaccatcgtgctgcctcagggcaagttcgcgacc
ttcctacgtgcctcgtctgacgagcgtcacaagctcctgcgtgacgtctttggcacacgg
gtctatgacgagcttcaggaggagctgcgtcgccgctccctggcggcgcgagggcaggtc
gagcagtcgcatcagcgtctgctcgccgctgctgaggccttcgccgaggttatctcgccc
gaggaggccgaccagcacagtccggagcgcacggcgtcccagcaggcgggggcaagcgag
gcatcgccgtccccgagcgcaccagaggaggcggaggcgctccaccccaccgccgccgag
cggctgcgtcgcgccgtcgaggctgccacgcccggccaggaggtgatcatcgagatcacc
tcgtcggtgaccgggcagacggcggcgcggctgcgcgaggcccaggacgaagtcgcctgc
gcacagcgcaggcgtgagacggcacgtggggcgctggataaggcccaggcgctgaccgaa
ctgctggcacagcgtcgcgctctcctccaggctcacgatgagctggaggctggcgctcag
gacgccgccctgactgcccgcaccctggagctggcccagcgggcggcctcggtggcagtc
atggtcgagcgagcccgcaaggatgctgaggctgccagccaggtcctgacgcaggagcct
ggccagcagccgcaggacgaggccacgaccgtgctcctcgcccaggcgctcagtgagtgc
gagcaggccctgggcacggtgcgcgactgggaccaggtggcgcacgccccgcagccgggc
accgctctccagctaccagcctccgaccgtctgctcgcgcacctggaggcgcaggcgcgc
gagcaacgcgaccaggccgccgccctggcggaggccgaggccacggagtcccaggtctct
ggtcgccgcgagcacctggacgccctgcgccaggagcaggagcgtcagtccgagcagacc
gaacagacccgtcaggcgctggcctcgcttccgcagcgcggcgaacagctacgtgcgctc
ctggccacggcgcaccaggcccaggagcgcctgcccgaccttcgctccgcctacgaggcc
gccgggcgccgggccgaggctgccgagcaggctcagcccgtctccaccgcgctcgctcag
gcccgggagtgcgccgaacaggcccgcaaggaggctgacgcagttgagaagcaggcccac
gccctgcgcagcgcctggatcaacgccacctcggcatccctggtcggagaactctcacca
ggccagccgtgtcccgtatgcggctcgtccgagcatccacgccctgcctccgccgtcgcc
gagcccgtctcacgcgcggacctggacgccgccgaccagtcctcggctcgcgcccgccag
aacctggaggctgcccgcgccgaggtcacagctctccaggcccggctcacccagctttcc
gccgcagccgagggccgctcgcccgagcaggcagcagcgcagctcaccgctgcgcgcacg
gccctgaccggagcccaggaggaggccgaaccacgcacgcgcctgcaggaggagctggac
tcactgacagcacgagagtccgagctccgccagcagctgagcgagcacaaggaggcagcc
gcagccacagccgccacgctcgcctccgagcagcaagcactagaccgtgacctggagcag
atcgcgacggcacgaggtacctacaccaccgtggcgtcgcggcgcgccgagctcgggcgc
ctcgcgcaggtggctgaggccttgacggcccactggcgcacgatcggcgcactcgtgcag
acctcacgcagctcccagcaggacctcgcaggcgagatgaccaaggccggcttcagctct
cgtactggtctggaggcggcacggcgctcagaggctgaggtgaagcatctgtccagcctc
gtgcgcgagcgcgacgccgaggctgcgcgcgtgcgcgcaggcctggcccgtccggagatc
agcatgctcacgggccaggaggagcccgggctcgagcaggcccggacggtcctggccgag
gccgaacaggcctggcagtccgcggtctcacagcacgccagcgtccaggcacaggctgag
tctgtgcgtacgcgtgcgcgccgcctgcgccaggccgcagccgatctgaccaccgtggtc
ggggacaacgccgccctcctccacgtggcggcgctggcggcgggtgagaaccccgaggct
acgccgctggccacgtgggtcctgaccgaacgattcaaggacgtgctcaccttcgccaac
caccgcttagagaccatgtccggcggacgctacgagctcatccaggtggacgaggaaaag
aacagcgcccgccggcggggcctgggcatgggcgtcctggaccgccttggcggggaacgg
actcgtgacccacgcaccctgtccggaggcgagaccttctacgtctccctcgccctggcc
ctagccctggcggacgtcgtggccaccgagtccggcgggatcctcatggaaaccctcttc
gtggacgagggcttcggctccttggacccccagaccctccaggacgtcctcaacgagctc
ggccagctccagcagggcgggcgcacggtcggcatcgtcagccacgtcgaggagctgcgc
cgtcagatccccgaccaggtcagggtcaccgcaacgcctgagggctcacgactgacagtc
gtggcctcctag
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