Actinomyces urogenitalis: R3I39_05235
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Entry
R3I39_05235 CDS
T09523
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
auo
Actinomyces urogenitalis
Pathway
auo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R3I39_05235 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
auo03021
]
R3I39_05235 (rho)
03019 Messenger RNA biogenesis [BR:
auo03019
]
R3I39_05235 (rho)
Transcription machinery [BR:
auo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
R3I39_05235 (rho)
Messenger RNA biogenesis [BR:
auo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R3I39_05235 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
NACHT
SAP
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WOO96164
LinkDB
All DBs
Position
1250960..1252927
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AA seq
655 aa
AA seq
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MTETSSAQPSLTTMRLAELQQLASSMGLKGTSRLRKSELVAAIREAGPASAAPTRAARKA
ASATKAPAQPTASAQPAEGEEQPRPRRRRATAPAAAPKHEDLASLELDLPARSQEQAPAR
GRAERVAHDEVVSGFEAREAGREGSRRSRRRAQAAAGAPERQQRGPVNDSAEDHLDAKAA
LMRDLADATGTAAVEPAERRRTNGNEARGNQGWDEEEGRGGRRRRGRKRREREGGQNEQR
QGGQNERAPREDEVLLPVAGILDVADANHAYLRTSGYLPGAKDVYVSGQQIKDNGLRAGD
AVTGWVREGGETANPGGGRGNRRNNRANRQKYNPLVSVETVNGMDPERAKRRPEFTKLVP
LYPQEQLRLETTPKALTPRVIDLVSPIGKGQRGLIVSPPKAGKTIVLQQIANAIAVNNPE
AHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPASDHTTVAELAIERAKRLVELGQDVV
VLLDSITRLGRAYNLAAPASGRILSGGVDASALYPPKRFFGAARNIENGGSLTILATALV
ETGSKMDEVIFEEFKGTGNMELRLSRQLAEKRIFPAVDVAASSTRREELLIDPAQLKIMW
RLRRLFSGLEQQQALELVLGKLKETQSNAEFLMVISKTTPQGTSLADADDEATLA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagacttccagcgctcagccatcgctgacgaccatgcgtctggccgagcttcag
cagcttgcatcctccatgggcctcaagggcacctcacgcctgcgcaagagcgagcttgtg
gccgccatccgtgaggctgggcctgcctccgccgcgccgacccgcgcggcccggaaggct
gcctctgcgaccaaggctcctgcgcagcccaccgcttccgcccagcctgccgagggcgag
gagcagccccgtccgcgtcgtcggcgcgcgaccgccccggctgcggcccccaagcatgag
gacctggcttccctggagcttgacctgcccgcgcgcagccaggagcaggctcctgcccga
gggcgcgccgagcgcgttgcgcacgacgaggtcgtctctggctttgaggctcgtgaagcg
ggccgtgagggctcgcgtcgttcgcgtcgtcgtgcccaggctgctgccggggctcctgag
cgccagcagcgcggccccgtcaacgactccgccgaggaccacctggacgccaaggccgcg
ctcatgcgtgacctggctgacgccaccggcacggccgccgtcgagccggccgagcgccgt
cggacgaacgggaacgaggcccggggcaaccagggctgggacgaggaggagggacgcggt
ggccgccgccgtcgcggacgcaagcgtcgcgagcgcgagggtggccagaacgagcagcgt
cagggcggccagaacgagcgcgccccgcgcgaggacgaggtcctcctgcccgtggccggc
atcctggacgtggccgacgccaaccacgcctacctgcgcacttccggctacctgccgggc
gccaaggacgtctacgtctcaggccagcagatcaaggacaacggtctgcgtgcgggcgac
gccgtgaccggctgggttcgcgagggtggcgagaccgccaaccccggtggtgggcggggc
aatcgtcgcaacaaccgtgccaaccggcagaagtacaacccgctggtcagcgtcgagacc
gtcaacggcatggaccctgagcgggccaagcgccgcccggagttcaccaagctcgtcccg
ctctacccccaggagcagctgcgcctggagaccacccccaaggcgctgaccccgcgtgtg
atcgacctggtctcgccgattggcaagggccagcgcggactcatcgtctctccgcccaag
gccggtaagacgatcgtgctccagcagatcgccaacgcgatcgccgttaacaaccccgag
gcccacctcatggtcgtgctcgttgacgagcgccccgaggaggtcacggatatgcagcgc
acggtcaagggtgaggtcatcgcctccaccttcgaccgcccggcctcggaccacaccacc
gtcgccgagctcgctatcgagcgtgccaagcgcctggtggagctgggccaggacgtggtg
gtgctgctggactccatcaccaggctcggccgcgcctacaacctggccgccccggcctcc
ggacggatcctgtctggtggtgtggacgcctccgccctctacccgcccaagcgcttcttc
ggcgccgcccgcaacatcgagaacggcgggtcgctgaccatcctggccacggccctggtg
gagaccggctcgaagatggacgaggtcatcttcgaggagttcaagggcaccggaaacatg
gagctgcgactgtcccgccagctggcggagaagcgcatcttcccggccgtggacgtggct
gcctcctccacgcgccgtgaggagctgctcatcgacccggcccagctgaagatcatgtgg
cgcctgcgccgcctgttctccggcctggagcagcagcaggccctggagctcgtgctcggc
aagctcaaggagacccagtccaacgcggagttcctcatggtcatctccaagacgaccccg
cagggcacctcgctggccgacgccgacgacgaggccacgctcgcctga
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