Actinomyces urogenitalis: R3I39_05305
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Entry
R3I39_05305 CDS
T09523
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
auo
Actinomyces urogenitalis
Pathway
auo03420
Nucleotide excision repair
auo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R3I39_05305
03430 Mismatch repair
R3I39_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auo03400
]
R3I39_05305
Enzymes [BR:
auo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R3I39_05305
DNA repair and recombination proteins [BR:
auo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R3I39_05305
MMR (mismatch excision repair)
Other MMR factors
R3I39_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_12
Rab3-GTPase_cat
ResIII
MlaD
Motif
Other DBs
NCBI-ProteinID:
WOO96176
LinkDB
All DBs
Position
1264773..1267691
Genome browser
AA seq
972 aa
AA seq
DB search
MNAMNSLFDALPMPGSSKPPAETVLPSLAPASGWDDGWADSLAQAEAPAEEWAPEPEDEG
QAPEPEDLAAVASSWEERQAETAALVARAQANAAAARARAAGQGESADLGAGRGSGTPGY
AWGVTVADPTELVKGLNPAQEQAVTHVGAPLLIIAGAGSGKTRVLTHRIAYLLATGRARP
GEILAITFTNKAAAEMRERVAGLVGPAGERMWVSTFHSACVRILRREHEAAGLRSTFSIY
DSADSQRLITLIVKELGIDSKRFTPKTFANRISDLKNELITPAQYAERALTSNPLERHLV
EVYRAYAARLVAANALDFDDLIMRTVQLLQTKPAVAEMYRRRFRHILVDEYQDTNHAQYV
LVRELTGGPGTSGEGSAVPAAELTVVGDSDQSIYAFRGATIRNIEEFEQDYPAARTILLE
QNYRSTQNILDAANAVISRNSGRRKKNLFTESGAGTPVIGYVADSEHDEARWISSEIDRL
ADEEGVRPRDVAVFYRTNAQSRALEEAFLRSGQPYKVVGGTRFYERREIKDAIAYLRAVD
NPDDDVNIRRILNVPKRGLGDKAEAVLAEHAARYGVSFGTAVADAAGALRPLEQGEGAGD
LDAGGTEAPAVEGLATRARTQVTKFHELLTGLRHQLAAGDGVADLLDSVLDASGYLAELR
ASDDPQDATRVENLAELHSVAADFQAANPDAVLADFLERVSLVADADQLPDSADLGDEAA
RKAAEDGQVTLMTVHTAKGLEFPVVFVTGMEDGTFPHSRSLADDAELAEERRLAYVALTR
ARERLYVTRAAVRSAWGSAQAMPASRFLDDIPTETMEWKRLASSMDALRGGGTGWGSSWG
EGGFGSGAGSYSDDDDFAPAFGSGKRSGKLGRVETPKDRFEARRAQRLAKRGKPTRLDGS
CADGGAADASELPAAVQGLKVGDQVRHDSYGLGEVTAIEGSGRSTVAHVAFTIDGARATK
RLMLRLAPLAKA
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatgaactcactcttcgacgccctccccatgcctggcagcagcaagccgccg
gctgagaccgtcctgccctcgctcgctcccgcctctggctgggacgacggctgggcggac
tccctggcccaggcggaggcgcctgctgaggagtgggcgcccgagccggaggacgagggc
caggcgcccgaaccggaggacctggccgccgtcgcctcgtcctgggaggagaggcaggct
gagaccgcggccctcgtggcccgggctcaggccaacgccgccgcggcacgtgccagggcc
gccggccagggcgagagcgcagacctgggggccgggcgaggcagcgggacaccgggctac
gcctggggcgtgacggtcgcggacccgaccgagctggtcaagggcctcaacccggcgcag
gaacaggccgtgacccacgtcggcgcgcccctgctcatcatcgccggcgccggctcgggc
aagacccgggtgctcacccaccgcatcgcctacctgctggccacgggccgggcccgtccc
ggcgagatcctggcgatcaccttcaccaacaaggcggccgcggagatgcgcgagcgcgtg
gccggcctggtgggtccggccggcgagcggatgtgggtgtccaccttccactccgcctgc
gtgcgcatcctgcgccgcgagcacgaggctgccgggctgcgctcgaccttctccatctat
gactctgctgactcccagcgcctcatcacgctgatcgtcaaggagctggggatcgactcc
aagcgctttacgcccaagaccttcgcgaaccggatctcagacctgaagaacgagctcatc
acgccggctcagtacgccgagcgagccctgacctccaaccccctggagcggcacctggtg
gaggtctaccgcgcttacgccgcgcggctggtggcggccaacgcactggactttgacgac
ctcatcatgcgcaccgtccagctcctgcagaccaagcccgcggtcgccgagatgtaccga
cggcgcttccgccacatcctggtggacgagtaccaggacaccaaccacgcccagtacgtg
ctcgtgcgtgagctcaccggcggtcccgggacctcaggggagggcagcgccgtgcctgcg
gccgagctgacggtggtgggcgactccgaccagtccatctacgccttccgcggcgccacg
atccgcaacatcgaggagttcgagcaggactacccggccgcgcgcacgatcctgctggag
cagaactaccgctccacccagaacatcctcgacgccgccaacgccgtcatctcccgcaac
tccgggcgacgcaagaagaacctgttcaccgagtctggagccggcaccccggtgatcggc
tacgtcgcggactccgagcatgacgaggcgcgctggatcagctccgagatcgatcgcctg
gctgacgaggagggcgtgcgcccgcgcgacgtcgccgtcttctaccgcaccaacgcccag
tctcgcgccctggaggaggccttcctgcgctcgggccagccctacaaggtggtgggtggt
acccgcttctacgagcgtcgcgagatcaaggacgccatcgcctacctgcgggccgtcgac
aacccggacgacgacgtcaacatccgccgcatcctcaacgtgcccaagcgaggactgggg
gacaaggctgaggcggtgctcgccgagcacgccgcacgctatggcgtctccttcggtacc
gcggtggcggacgcggccggcgcgctgcgtcccctggagcagggggagggcgccggggac
ctggacgccggcgggaccgaggccccggcggttgagggcctggcgacccgcgcccgcacg
caggtcaccaagttccacgagctgctcaccggcctgcgccaccagctggccgcgggcgac
ggcgtggctgacctgttggactccgtgctcgacgcctcgggctacctggccgagctacga
gccagcgatgacccccaggacgccacccgcgtggagaacctggccgagctgcactcggtg
gcggctgacttccaggcagccaaccccgacgcggtgctcgccgacttcctggagcgcgtc
agcctggtggcggacgcggaccagctgccggactcggccgatcttggggatgaggccgcg
cgcaaggccgccgaggacggccaggtcacgctcatgaccgtccacacggccaagggcctg
gagttcccggtcgtcttcgtcaccggtatggaggacggtaccttcccgcactcgcgctcc
ctggctgacgacgccgagctggccgaggagcgccggctcgcctacgtggctctcacccgt
gcccgcgagcgcctgtacgtcacccgggcggcggtgcgctcggcctggggcagtgcccag
gccatgcccgcctcgcgcttcctggatgacatccccaccgagacgatggagtggaagcgt
ctggcctcctccatggacgccctgcgcggaggcgggaccggctggggaagcagctggggt
gagggcggcttcggctccggggctggctcctactcggacgacgacgacttcgcccccgcc
ttcggctcaggcaagcgctcgggcaagctggggcgggtggagacgcccaaggaccgtttc
gaggcgcgtcgggcgcagcggctggccaagcgtggcaagcccacccgtctggacggctcc
tgcgcagacggcggggccgctgatgcctccgagcttcccgcagcggtccaggggctcaag
gtgggcgaccaggtccgtcacgactcctacggcctgggcgaggtgacggcgatcgagggc
tcgggacgctcaaccgtggcgcacgtggccttcaccatcgacggcgcccgggcgaccaag
cgcctcatgctgcgcctggcgcccctggccaaggcctga
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