Actinomyces urogenitalis: R3I39_07790
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Entry
R3I39_07790 CDS
T09523
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
auo
Actinomyces urogenitalis
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
auo03032
]
R3I39_07790
03400 DNA repair and recombination proteins [BR:
auo03400
]
R3I39_07790
Enzymes [BR:
auo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
R3I39_07790
DNA replication proteins [BR:
auo03032
]
Prokaryotic type
DNA Topoisomerases
R3I39_07790
DNA repair and recombination proteins [BR:
auo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R3I39_07790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
WOO94593
LinkDB
All DBs
Position
complement(1846394..1848928)
Genome browser
AA seq
844 aa
AA seq
DB search
MSKSATTTPPPIDGEIVEQDLSTEMRTSFLEYAYSVIYARALPDARDGLKPVQRRILFQM
DRMGLRPDRPHVKSSRVVGDVMGRLHPHGDVAIYEALVRLAQPFTMRLPLIDGHGNFGSL
DDGPAAPRYTEARLASPALALTADIDEDTVDFSPNYDYTLTEPDVLPAAFPNLLVNGTSG
IAVGMATNMPPHNLVEVVSAARHLITHPEASLEDLMAFVPGPDLPTGGMIVGLDGIREAY
RTGRGKFLTRATARIENITPRKKGIVVTELPYLVGPEKVIARIKDAVSAKKLQGITDVAD
LTDRKNGTRLVIGVKNGYNPEAVLAQLYKHTPLEDSFGINNVCLVDGQPRTLGLRELLDV
FVRHRMTVVERRTRFRLGKRRERQHLVEGLLIAILDIDEVIQVVRSSDDAATARTRLMQV
FDLSEAQASYILELQLRRLTKFSVIELEKERDELAREIEQLEAILADETLLRGVVSRELA
AVAEEFGTPRRTVLLEAAGSGAGALAGGAGAPGGAGAGAGQAMKEAVAASLAATASQVPL
TVPDDPCRVLLSATGLVARVAGAEAVPRTGERQRHDALTSQVPTTARSRVGVVTDTGRLV
VMEVLSTPEVPRLEGAPSLAGGQPVGLLVDLEPGETVVGLVPVGEAQREPVVLATAGGVI
KRVKPGDEPARGESWEVISLADGDRVVFAGIAADTDVLTLVTDDAQLLRFEASKVRPQGR
GAAGMAGISLHEGARVIAGASVPAELLAEAVVVTIADAEGALPGMDSGSVKVTPLDRYPA
KGRATGGVRAQRFLRGEDQLVVAWVGVGPARAVGSGGQGVALPEVDERRDASGTALSAPV
AAVG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtccgccaccacgacgcccccacccatcgacggcgagatcgtcgagcaggac
ctgtccaccgagatgcgtaccagcttcctggagtacgcctactcggtgatctacgcccgg
gcgctgcctgacgcccgtgacgggctgaagcccgtccagcgccgcatcctgttccagatg
gaccgcatggggctgcgcccagaccgtccgcacgtgaagtcctctcgcgtggtcggtgac
gtgatggggcgcctgcaccctcacggtgacgtggccatctacgaggcgctggtccgcctg
gcccagcccttcacgatgcgcctgccgctgatcgacgggcacggcaacttcggctcgctg
gacgacggcccggccgcgccgcgttacaccgaggcccggctggcctctcccgcgctggcg
ctgacggcggacatcgacgaggacaccgtcgacttctcccccaactacgactacaccctc
accgagcccgacgtcctgcccgccgccttcccgaacctcctggtcaacggcacctcgggc
atcgcggtcggcatggccaccaacatgcctccccacaacctcgtcgaggtcgtcagcgcc
gcccgtcacctcattacccaccccgaggcgagcctggaggacctcatggccttcgtcccc
gggccggacctgcccaccggcggcatgatcgtggggctggacggaatccgcgaggcctac
cggaccggacgaggcaagttcctcacccgcgccaccgcccggatcgagaacatcacgccg
cgcaagaagggcatcgtcgtcaccgagctgccctacctcgtgggcccggagaaggtgatc
gcccggatcaaggacgccgtgagcgccaagaagctccagggcatcacggacgtggcggac
ctgaccgaccgcaagaacggcacgcgcctggtcatcggggtcaagaacggctacaacccc
gaggcggtgctcgcccagctctacaagcacacccccttggaggactccttcgggatcaac
aacgtgtgcctggtcgacggccagccgcgcaccctgggactgcgcgagctgctcgacgtc
ttcgtgcgtcaccgcatgacggtggtggagcggcgcacccgcttccggctaggcaagcgg
cgcgagcgtcagcacctggttgagggactgctcatcgcgatcctggacatcgacgaggtc
atccaggtggtgcgctcctccgacgacgcagccaccgcccgcacccgcctcatgcaggtc
tttgacctgtccgaggcccaggcctcctacatcctggagctgcagctgcggcgcctgacc
aagttctccgtcatcgagctggagaaggagcgcgacgaactggcccgcgagatcgagcag
ctggaggccatcctggccgacgagacgctgctgcgcggcgtcgtctcacgcgagctggca
gccgtggccgaggagttcggtacaccgcgccgcacggtcctgctggaggccgcaggttcg
ggggccggcgccctggccggtggcgcgggagctcccggtggggccggcgccggggccggg
caggcgatgaaggaggccgtggcggcgagcctggcggccaccgcctcccaggtcccgctc
acggttccggacgacccctgccgtgtgctgctcagcgccaccgggctggtggcccgggtg
gctggcgccgaggcagtcccacgtaccggggagcggcagcgtcacgacgcgctgaccagc
caggtgccgacgacggcgcgcagccgagtcggcgtcgtcaccgacacggggcggctggtg
gtcatggaggtgctctccactcccgaggtgcctcgtctggagggggcgccgtcactggct
gggggccagcccgtgggcctgctcgtggacctggagcccggtgagacagtggtcgggctc
gttcctgtgggcgaggcccaacgcgagcccgttgtgctggcgacggccggcggcgtcatc
aagcgggtcaagccgggcgatgagcccgcacgtggcgagagctgggaggtcatctccctg
gccgacggcgaccgtgtggtcttcgccggtatcgcagcggacacggatgtgctcaccttg
gtcaccgatgacgcccagctcctccgctttgaggcctcaaaggtccgccctcagggacgc
ggggccgcgggcatggcggggatcagcctgcacgagggtgcccgggtcatcgccggggca
tcggttccggccgagctgctcgccgaggccgtcgtcgtcacgatcgccgacgccgagggg
gccctgccggggatggactcgggctctgtcaaggtcactccgctggaccgttacccggct
aagggacgggctaccggcggtgtgcgtgcccagcgcttccttcgcggcgaggaccagctg
gtggttgcctgggtgggtgttggccctgcgcgcgcggtcggcagcggcggccagggggtg
gccctgccggaggttgacgagcgccgagacgcctcgggaacggcgttgtccgcacctgtg
gcggctgtggggtag
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