Actinomyces urogenitalis: R3I39_08005
Help
Entry
R3I39_08005 CDS
T09523
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
auo
Actinomyces urogenitalis
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
auo03051
]
R3I39_08005 (pafA)
Enzymes [BR:
auo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
R3I39_08005 (pafA)
Proteasome [BR:
auo03051
]
Prokaryotic proteasome
Bacterial regulatory particles
R3I39_08005 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WOO94632
LinkDB
All DBs
Position
1897484..1898902
Genome browser
AA seq
472 aa
AA seq
DB search
MSAPARRVIGVETEYGITCASSAGGPPPLDADHAARLLFEPVVARGRSSNVFTRGGARLY
LDVGSHPEFATAECDRLEDLLAQDRAGELTMADLAEQANARLAQQGVPGRIHLLKNNLDA
EGTGFGCHENYLVRRRGDFWNDARTLVPYLVTRQILVGAGHVMTGPQGEAVFVFSQRADQ
MEDAVSSATTRSRPLINTRDEPHADAERYRRMHVIVGDSNIAQGSTLLKVGAMDLLLDYL
EEGGDLSDLQLARPMRDIRTVCHDLGGSTPLELADERTITAVDLQAEHLRRVVSHTAHMD
LSPLQREVLDLWERGVEAVRAGRPQDVATELDWAAKYQLLTRYAERAGTGLDDPRVARLA
LAYHDVTTAGLRARLEASGLLRRWVGEEACRQAVTVPPATTRAHLRGTAIGRAQDLRRDL
TADWVGLKLDDGRTPAIALRDPFACRDERVDALLAAMEEGAQGWDHTLAQGV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgccggccaggcgtgtcatcggcgtcgagacggagtacggcatcacctgtgcc
tccagcgcgggcggcccaccgcccctggacgccgaccacgctgcacggctcctctttgag
ccggtcgtggcccggggacggtcctcgaacgtctttacccggggcggcgcgcgcctctac
ctcgacgtcggctcccacccggagttcgcgaccgccgagtgcgaccgtctggaggacctg
ctggcccaggaccgcgccggggagctgacgatggcggacctggccgagcaggccaacgcc
cgtctggcccagcagggggttcccggacgcatccacctgctgaagaacaacctggacgcc
gagggcaccggcttcggctgccacgagaactacctcgtgcgccgtcgtggggacttctgg
aatgacgcccgcacgctggtgccctacctggtcacgcgccagatcctcgtgggcgccggg
cacgtgatgaccgggccccagggcgaggcggtcttcgtcttctcccagcgcgccgaccag
atggaggacgcggtctcctcggcgaccacgcgttcacgtccgctcatcaacacccgtgac
gagccgcatgccgacgccgagcggtaccggcgcatgcacgtcatcgttggtgactccaac
attgcccagggctcgaccctgctcaaggtcggtgccatggacctgctcctggactacctg
gaggagggcggggacctcagcgacctccagctggcccgtcccatgcgcgacatccgtacc
gtctgccacgaccttggcgggagcacgcccctggagctggcggacgagcgcacgatcacc
gctgtcgacctgcaggccgagcaccttcggcgggtcgtctcgcacaccgcgcacatggac
ctcagccctctccagcgtgaggtcctggacctgtgggagcgcggcgtggaggcggtgcgt
gcggggcggccgcaggacgtggcaaccgagctggactgggcggcgaagtaccagctgctc
acccgctacgccgagcgcgcgggcacgggcctggacgatccccgcgtggcacgcctggct
cttgcctaccacgacgtcacgacggcgggcctgcgcgctcgcctggaggctagcggcctg
ctgcgtcggtgggtgggggaggaggcctgccgccaggcggtcacggtccctccggccacg
acccgggcccacctgcgtggcaccgcgatcggccgtgcccaggacctgcgccgggacctg
acggcggactgggtgggtctcaagctggacgacggccggaccccggcgatcgccctgcgc
gaccccttcgcctgccgtgacgagcgcgtggacgctctcctggccgcgatggaggaaggt
gcccagggctgggaccacacgctggcccagggcgtgtga
DBGET
integrated database retrieval system
