Actinomyces urogenitalis: R3I39_09950
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Entry
R3I39_09950 CDS
T09523
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
auo
Actinomyces urogenitalis
Pathway
auo00061
Fatty acid biosynthesis
auo01100
Metabolic pathways
auo01212
Fatty acid metabolism
auo02024
Quorum sensing
auo04146
Peroxisome
Module
auo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
R3I39_09950
00071 Fatty acid degradation
R3I39_09950
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
R3I39_09950
09145 Cellular community - prokaryotes
02024 Quorum sensing
R3I39_09950
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
auo01004
]
R3I39_09950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
auo04147
]
R3I39_09950
Enzymes [BR:
auo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
R3I39_09950
Lipid biosynthesis proteins [BR:
auo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
R3I39_09950
Exosome [BR:
auo04147
]
Exosomal proteins
Exosomal proteins of breast milk
R3I39_09950
Exosomal proteins of breast cancer cells
R3I39_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WOO94983
LinkDB
All DBs
Position
2328974..2330827
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AA seq
617 aa
AA seq
DB search
MSDTSRSYLRPHYAPGVPATIAPVTEPLSRMLDDATRRFPDHIAIDFLGATTTYSQLSRQ
VAQAAETLRRAGIGRGDVVGLILPNCPQHVVLAYAAWRIGAIVAEHNPLAPAAQIREQIE
IHHGKVIIAWEKTLARLVQASGSLRAAGLADRQVYAVDLSRGLPWTSRMALRLPVAAARA
QRSELRGKVPAGVRSWDDAVAASTPLPAGHPLPEVGQTAVLLYTGGTTGSPKAVRLTHTN
LRSNAEMSLAWASQTCEAGQETFYAVLPFFHAFGLSLSLLCAVGLAATQVILPKFSADMV
LTAWKRRPATFFPGVPVMFDRIVARANATGADLSSCKIAVCGAAANPKAVAQAWEEATGG
VIIEGYGMTEASPIILGNPISPERRAGALGVPYPSTDVRLVDPEDTEVDVEPGQVGELLV
RGPQVFAGYWENPEETDAVLLPGGWLRTGDLVRQEADGFYVIADRRKELIISGGFNIYPT
EVEAAVRSMPQVEEVAVVGLPGGEGDAGNERVVAAILPKEGQTVTLEQVRSWAEQTLSHY
ALPRQIAILSEMPRSQIGKVLRRVVREELLAAREAASGAADAVASASVSAAASLVERLGE
AQASQSSQASQDAEEDK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacctcgcgcagctaccttcggccccactacgcccccggcgtgccggccacg
atcgcgccggtcaccgagccgctctcacgcatgctcgacgacgccacccgtcgcttcccc
gaccacatcgccatcgacttcctgggcgccaccacgacctactcccagctctcccgccag
gtcgcccaggcggccgagaccctgcggcgcgccgggatcggtcgtggcgacgtcgtcggc
ctcatcctgcccaactgcccccagcacgtggtgctcgcctacgccgcctggcggatcggc
gcgatcgtggccgagcacaaccctctggccccagccgcccagatccgcgagcagatcgag
atccaccacggcaaggtcatcatcgcctgggagaagacactggcccgcctggtccaggcc
tcaggctcgctgcgcgccgccggactggctgaccgtcaggtctacgccgtggacctgtcc
cgcggcctgccatggaccagccgcatggccctacggctgccggtggccgctgctcgcgcc
cagcgctccgagctgcgcggcaaggtccctgcgggagtgcgctcgtgggacgacgccgtg
gccgcctccaccccgctgcctgccgggcaccccctgcccgaggtcggccagaccgccgtc
ctgctctacaccgggggcaccactggcagccccaaggccgtgcgcctgacccacaccaac
ctgcgctccaacgccgagatgagcctggcctgggcctcccagacctgcgaggcaggccag
gagaccttctacgcggtcctgcccttcttccacgccttcgggctcagcctgtccctgctg
tgcgccgtgggcctggcagccacccaggtcatcctgcccaagttcagcgctgacatggtg
ctcaccgcctggaagcgccgccccgccaccttcttcccgggcgtgccggtgatgttcgac
cgcatcgtggcacgcgccaacgccaccggcgccgacctatcgagctgcaagatcgccgtg
tgtggagcagccgccaatcccaaggccgtggcccaggcctgggaggaggccaccggtggg
gtcatcatcgagggctacggcatgactgaggcctcccccatcatcctgggcaaccccatc
tcccctgagcgtcgtgccggggcgctgggcgtgccctacccctccacggacgtgcgcctg
gttgacccggaggacaccgaggtcgacgtcgagcccgggcaggttggtgagctgctcgtg
cgcggtccccaggtcttcgccggctactgggagaaccccgaggagaccgatgccgtgctg
ctgcccggagggtggctgcgcaccggtgacctcgtgcgccaggaggccgatggcttctac
gtcatcgccgaccgacgcaaggagctcatcatctccggcggtttcaacatctaccccacc
gaggtcgaggcggcggtccgctcaatgccccaggtcgaggaggtcgccgtcgtcggcctg
cccggaggtgagggggacgctggtaacgagcgcgtcgtggccgcgatcctgcccaaggag
ggccagacggtcaccctggagcaggtgcgctcttgggctgagcagaccctgtcccactac
gcgctgccgcgccagatcgcgatcctgagcgagatgccccgctcccagatcggcaaggtg
ctgcgccgggtcgtgcgcgaggagctgctggccgctcgcgaggcagccagcggcgccgcc
gacgccgtcgcctcagcctccgtcagcgcggccgcctccctggtcgagcgcctgggcgag
gcccaggccagccagtcctcccaggccagccaggacgctgaggaggacaagtga
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