Actinomyces urogenitalis: R3I39_10615
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Entry
R3I39_10615 CDS
T09523
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
auo
Actinomyces urogenitalis
Pathway
auo03420
Nucleotide excision repair
auo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R3I39_10615
03430 Mismatch repair
R3I39_10615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auo03400
]
R3I39_10615
Enzymes [BR:
auo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R3I39_10615
DNA repair and recombination proteins [BR:
auo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R3I39_10615
MMR (mismatch excision repair)
Other MMR factors
R3I39_10615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WOO95101
LinkDB
All DBs
Position
complement(2483349..2486807)
Genome browser
AA seq
1152 aa
AA seq
DB search
MMSTTPAASSAPQAELTPAYLARALGIHEPTPEQAAVICHPLSPVLVVAGAGSGKTATMS
QRVVYLVASGAVEPGEVLGLTFTRKAAAELAQRISVRLDALAGSGLIERDEEGLDPTIAT
YNSFAGTIVRDHGLRIGVDPDATLITEARAWQVVSAIVERRRQPLPLESPARVTELVLAL
DGALCENLLEVDQAREQLGELDSFFESLATVRGLKTAVKGFDTAMKTRLALLDLVQEYRD
VKRSQGMLTFGDQIALAYRVVSAPGSQEVVAALREQYRGVLLDEFQDTSTAQVRLLARLF
ADSGVTAVGDPNQAIYGWRGASAAALDEFHRAFNPAGCQAVHRGADPLTTVPVLPLSTAW
RNDSRVLEAANALSAPLRHHTPAPGDAPAPRVPVEQLHARPRQAGLAEGAVLGAYLADPL
QEAEVVASFLADRWNPQAQLAVLSRTRDSLLPVAEALRARSLPYEIVGIGGMLTIPEVAD
VRALLTVAANPERGDWLVRLLTAGGIGAADLAALYAHARRQMRGTSPFQPPADKSSQGAS
SVAQIPDAEPDSPMLAEAIEAVARSADCHPDGLAGVRVPGLSPAATRLADRLARQLRRVR
RAMRLPLADLVTLAEQCLDLDIEVAARVDDRIGRRGLDGLREVAEQFTRDLDSASLPSFL
EWLDAAEAHERALSAPEVEPEPGAVQLMTIHASKGLEWDHVAVIGMNEKGFPLYSTQPRE
DLSVRSKSWMGSADEFPHPLRMDAATLPPFTLGVLEPPEVDKDEVKDLLDQYCLALGRYG
VSEERRLAYVALTRARHDVLLTGSHLSKSSTTPRPMSRFLAELRRRDLVQPYGPGWVDFD
PEHGNGLVTRRARVLWPVQPGAADEAEDRDDVALARQQAAEEVAQACQDASVRLRHESEH
SEGDQQAAPEAEVDGEPSTLVARWCEEARVLLAEREQEASAPRQLHLPAHLAATQLDALR
TDPEELALHLRRPLPSQPSASARLGTVFHDAVTQRLSPHSALFSLEDAGVPDTVSAQDRQ
TLERWLATAQDLDLLQGYLLHDTEVEREMTISGVTLRCRIDAVFRREGSGEDEPAAWLIV
DWKTGRHHVPVDQLSVYVHVWAASLGIPAEAVRAAYAYVDYPGGKVDELSGQELLSMETL
TRTLSLAHAPGR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccaccacccccgctgcctcctctgctccccaggcggagctgacccccgcctac
ctggcacgggcgctgggcatccatgagcccacgcctgagcaggctgccgtcatctgtcat
cccttgagccctgtgctggtggtggcaggtgccggcagtggcaagacggcaaccatgagc
cagcgcgtggtctaccttgtggccagtggcgcggtcgagcctggcgaggtcctgggactg
accttcacccgcaaggcggcggccgagctggcccagcgcatcagcgtgcgcctggacgcc
ctggctggctcgggtctgattgagcgagacgaggaggggctggacccgacgatcgccacc
tacaactccttcgccggcaccatcgtgcgagaccacggcctgcgcatcggggtggacccg
gacgcgacgctcatcaccgaggcacgggcctggcaggtggtctccgccatcgtcgagcga
cgccggcagcccctgcccctggagtctcccgcccgagtcaccgagctggtgctcgctttg
gacggtgccctgtgcgagaacctgctggaggtggatcaggcccgcgagcagttgggtgag
ctggactcattcttcgagtccctggccacggtgcgggggctcaagactgcggtcaagggc
tttgacaccgcgatgaagacgcgtctggcgctgctggacctggtccaggagtaccgggac
gtcaagcgctcccagggcatgctgactttcggggaccagattgccctggcctaccgggtt
gtcagcgcaccgggatcacaggaggtcgttgcggcgctgcgcgagcagtaccgtggcgtt
ctgctcgacgagttccaggacacctcgacggcgcaggtcaggctcctggcccgtctcttc
gccgatagcggcgtgaccgccgtcggcgaccccaaccaggcgatctacggatggcgtggt
gccagcgccgcggcgctggatgagttccaccgtgccttcaatcccgctggttgccaggcg
gtccacaggggcgcggacccgctgaccaccgtcccggtcctgcccttgtccacggcatgg
cgcaatgacagtcgggtccttgaggcagcgaacgccctgtctgccccgttgcggcaccac
accccggcacccggggacgcgccggcaccgcgggtgcctgtggagcagctgcacgccagg
ccccgccaggcgggcctggctgaaggagccgtacttggtgcctacctggccgatccgctc
caggaggcagaggtggtcgcgagcttcctggcggacaggtggaacccacaggcgcagctg
gccgtgctcagccgtacccgggactcgctcctgcccgtggctgaggcgctgcgagcacgc
tcgctgccttacgagatcgtggggatcggaggcatgctcacgattccggaggtcgcggac
gtgcgcgccctgctcacggtggccgccaaccctgagcgcggcgactggctggtccgtctg
ctgaccgcaggcggcatcggcgcagcggacctggccgccctctacgctcacgctcgccgt
cagatgcgcggcacctcaccattccagccgcccgctgacaagagctcacaaggggcaagc
agcgtcgcgcagattccggacgccgagccggactctccgatgctggctgaggcgatcgag
gccgtggcccgcagcgcggactgtcatccggacgggctggcgggcgtccgcgtgcctgga
ctgagcccggcagccacgcgcctggctgaccgcctggcgcgccagctgcgtcgggtacgc
cgggcgatgcggttgccgctggcggatctcgtgacgctggccgaacagtgcctggacctt
gatatcgaggtcgcggccagggtcgatgaccggatcggacggcggggactggacgggctg
cgcgaggtcgccgagcaattcacccgggacctggactctgcgagcctcccgagcttccta
gagtggctggacgcggcagaggctcacgagcgtgccctgtctgccccggaggtcgagccc
gagccgggcgcggtccagctcatgacgattcacgcctccaaggggctggagtgggaccac
gtggcggtgatcggcatgaatgagaagggtttcccgctctactccacgcagccgcgtgag
gacctctccgtgcgctcgaagtcctggatgggctcggccgatgagttcccgcacccgctg
cggatggacgctgccaccttgccacctttcactttgggtgtccttgagccgcctgaggtg
gacaaggacgaggtcaaggacctgttggatcagtactgcctggcgctggggcgctacggc
gtctcggaggaacgtcgcctggcctacgtggccctgacacgcgctcgccatgacgttctg
ctcacgggctcccatctgtccaagagctcgacgacgccgcggccaatgagccggttcctg
gctgagctgcgacgccgtgacctggtccagccctatggccctggatgggtcgacttcgat
cctgagcacggcaacggcctggtgacgcgtcgtgcgcgggtgctgtggccggtgcagccg
ggagctgctgacgaggcggaggaccgtgacgatgtggccctggcgcgtcagcaggctgcg
gaggaggtcgctcaggcctgccaggatgcctctgtccggcttcgccatgagtctgagcac
agcgagggtgatcagcaggcagcgcctgaggcggaggtcgatggcgagccgagcaccctc
gtggcgcgctggtgcgaggaggcgcgtgttctgctggccgagcgcgagcaggaggccagt
gctccgcgtcagcttcaccttcctgcccacttggctgccacgcagctcgatgccttgcgc
accgatccagaggagctggccctccacctgcgcaggcccctaccttcccagcccagtgcc
tcggcgcggctgggcacggtcttccacgacgccgtcacgcagcgcttgtcaccgcattcg
gccctgttcagcctggaggatgctggcgtaccggacactgtctcggctcaggaccggcag
accctggaacgctggctcgccacggcgcaggaccttgacctgctccagggctacctccta
catgacacggaggttgagcgtgagatgacgatcagcggggtcaccttgcgctgccggatc
gacgcggtcttccggcgggagggcagcggcgaggatgagccggccgcctggctcatcgtc
gactggaagacgggccgtcaccacgtgccggtggaccaactcagtgtctacgtccacgtc
tgggctgcctcactcggcatcccggccgaggcggtcagggccgcctacgcctacgtcgac
taccccggtggcaaggtcgatgaactgagcggccaggagctgctgagcatggagacgctc
acccgcacgctcagtcttgcgcacgctcctgggcgctga
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