Aureispira anguillae: AsAng_0003210
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Entry
AsAng_0003210 CDS
T08565
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aup
Aureispira anguillae
Pathway
aup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AsAng_0003210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aup03019
]
AsAng_0003210
Enzymes [BR:
aup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AsAng_0003210
Messenger RNA biogenesis [BR:
aup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AsAng_0003210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
Utp25_C
Helicase_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
BDS09617
UniProt:
A0A915YAF5
LinkDB
All DBs
Position
complement(377913..379190)
Genome browser
AA seq
425 aa
AA seq
DB search
MTFENLRIIPPILKALKAQGYTHPTPIQAQSIPILLRGKDLLGCAQTGTGKTAAFSIPVL
QNIFLDQQNAPQQKGVRKIKALIVTPTRELAIQIGENFTAYAKFTKIRSTVIFGGVKQGA
QTQALKRGVDVLVATPGRLLDLMQQGFITLKHIDYFILDEADHMLDMGFIHDIRKIIAKL
PEQRQSLFFSATMPPAIVSLSQKILGNYERVTIKPEQATAERVEQVIYFVSKPNKRKLLV
HLLKTEQMHSILVFSRTKYGADKIVRLLKKSDIKAEAIHGNKSQGARQRALNDFKNGKIN
VLVATDIAARGIDVDELSHVINYDLPNIAETYVHRIGRTGRASASGIALSFCDKDERPYL
KKIEALIKQNIPVVNDHPFVEELTETTSPKPSKPSGNRSRSSSSRNRGKNNYRKKRRSFA
KKKNS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaaaatttaagaataatcccccccatccttaaagctctaaaagcgcaaggt
tatacccaccctactcctatccaagctcaatctattccaattttattacgaggcaaagat
ctattgggttgtgctcaaactggtacaggaaaaacggctgctttttcaattcctgtgcta
cagaatattttcctagatcaacaaaatgctccacagcaaaagggagtccgtaaaataaaa
gcattgattgttacgccaacaagggagttagccatccaaattggagaaaactttacagct
tacgctaaatttacaaagattagaagtacggttatttttggtggggtaaaacaaggagct
caaacacaggcactaaaaaggggagttgatgttttggtggctacgcctgggcgattattg
gatttgatgcagcaaggttttattaccttaaaacacattgactactttattctagatgag
gcagaccatatgcttgacatggggtttattcacgatatacgaaaaatcattgccaaatta
cctgaacaacgtcaatctcttttcttctctgcaactatgccacctgctattgttagttta
tcacaaaaaatattaggtaactatgagcgagtaaccatcaagcccgaacaagctacagcc
gaacgggtagaacaggttatttattttgttagcaagcccaacaaacgcaaactcttagtg
catctattaaaaacagagcagatgcattctattttagttttttctagaactaaatatgga
gcagataagattgttcgtctattaaaaaaatcagacatcaaagcagaagcgatccatgga
aataaatctcaaggggcaagacaacgtgccttaaatgattttaaaaatggaaagataaat
gttttggtcgcaacagatattgctgctcgtggtattgatgtcgatgagctgtctcatgtt
atcaattacgatttgccgaacattgcagaaacctatgtacacagaattggtcgtacagga
agggctagcgcaagtggtatcgccctctctttttgcgataaagatgaacgtccttattta
aagaaaattgaggccttaataaagcaaaacattcctgttgtaaacgatcacccctttgta
gaagaactgacagaaactacttcccctaaaccatctaagccatctgggaatagatctaga
tcttcttcttctagaaatagagggaaaaataattacagaaaaaaacgacgttcctttgcc
aagaaaaaaaattcataa
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