Aureispira anguillae: AsAng_0033640
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Entry
AsAng_0033640 CDS
T08565
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aup
Aureispira anguillae
Pathway
aup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AsAng_0033640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aup03019
]
AsAng_0033640
03009 Ribosome biogenesis [BR:
aup03009
]
AsAng_0033640
Enzymes [BR:
aup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AsAng_0033640
Messenger RNA biogenesis [BR:
aup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AsAng_0033640
Ribosome biogenesis [BR:
aup03009
]
Prokaryotic type
rRNA helicases
AsAng_0033640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
BDS12640
UniProt:
A0A916DUL7
LinkDB
All DBs
Position
complement(3982244..3984013)
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AA seq
589 aa
AA seq
DB search
MSTFEELGLNPNVLKALGDLGFEQPTKVQEQAIPFVLGSDRDLVALAQTGTGKTAAFSLP
IIHKLDKNEKAIQALVLCPTRELCIQISKDIASYTKYEKGIQTVSVYGGAPIDGQIRLLR
KGCHIVVGTPGRVRDLIERRKLDIREIKFLVLDEADEMLTMGFKDELDAILASAPEEKQG
LLFSATMPREIDAIAANYMRDPEKIEVSSRNSANLDVKHVYCVARSSDRYRALKRIADIS
PEMYGIVFCRTRAETKEVADWLMADGYSADALHGDLSQAQRDYVMGRFRKKSIQLLVATD
VAARGIDVNNLTHVLHYKIPDQLENYIHRSGRTGRAGNKGTSIALLTSKETHKVRLLEKK
IGQKFERRLIPTGEQVCEKRLFSLINKIATTEVDEGIEKYLPTVYEQLEALSKEEILQKF
VSLEFQRFLNYYKNAGDLNVTGKEGKRREDRKRRDRSNSNLARFYINVGSKHKITTPKMI
GLINDSLRVKGVEIGKIEIMKGFSFFEIDKTYETKLMNGFRTGMQVTGVNVVVERTADRT
KGRRDSRGNGNSRFKRGKDKSREGRPREGRDRDRSGKRGKSFKPKKKRY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttgaggagttggggctcaatcccaatgtattaaaagctttgggggatttg
ggatttgaacaaccgactaaagttcaagaacaagcgataccttttgttttaggatctgac
cgtgatctagtcgctttggctcaaacaggaacaggcaaaacagcagcatttagcttacct
attatacataaactagataaaaacgaaaaagctattcaagctttggttttgtgcccaaca
agagagttgtgcattcaaatttcaaaagatattgctagttataccaaatatgaaaaagga
atccagacggtctctgtttatggaggtgccccaattgatgggcaaatccgtcttttgcgt
aagggctgccatattgtagttggaactcctggacgagtacgtgatcttatcgaaagacgc
aagctggatattcgtgaaatcaagtttttggttttggacgaggcagatgaaatgttgacc
atggggttcaaagacgagttggatgctattttggcttctgctcctgaagagaaacaaggt
ttgttattttcggctactatgcctagagagattgatgccattgctgccaattatatgcgt
gatcctgaaaaaattgaggtgagttctagaaactcagccaatttggatgtaaaacacgtt
tattgcgtggctcgatcttcggatcgttatcgtgcattaaagcgcattgctgatatttca
ccagaaatgtacggtattgtattttgccgtactcgagcggaaaccaaggaagttgccgat
tggttgatggcagatggatattctgcggatgccttgcacggagatttgtcgcaagctcag
cgagattatgtaatggggcgttttcgcaaaaaaagcattcaattattggtagctacagat
gttgctgctcgtggaattgatgtcaataacttgacgcatgttttgcattataaaattccc
gatcaattagaaaattatatccatcgaagcggtcgtacagggcgtgctggtaacaaagga
acttctattgctttgttaacaagtaaggaaacgcacaaggtacgcctattggagaaaaaa
attgggcaaaagtttgaacgtagattgattcctactggcgaacaggtttgtgaaaaacgt
cttttttctctgattaataaaattgcaacgacagaagttgatgagggcatcgagaaatat
ttgccaacagtgtatgaacaattagaggctttgtctaaagaagaaattcttcaaaaattt
gtctctttagagtttcaacgtttccttaattactataagaacgctggcgatctaaatgta
actggaaaagaaggaaaacgcagagaggatcgaaaaagaagagatcgcagcaattctaac
ttggctcgtttttatatcaatgtaggttctaaacataagattacaactcccaaaatgatt
ggactaattaacgatagtttgagagttaagggagtagaaattggaaaaattgaaatcatg
aaaggcttttccttttttgaaattgataaaacctatgagaccaaattgatgaatggcttc
cgtactggaatgcaggttactggggtaaatgttgttgttgaaagaacagctgatcgtacc
aagggaagaagagatagtagagggaatgggaacagccgctttaaaagaggaaaggataag
tcaagagagggtagaccaagagagggtagagatcgtgatagaagcggcaagcgtggaaaa
tcatttaaaccaaagaaaaaacgttactaa
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