Aureispira anguillae: AsAng_0040090
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Entry
AsAng_0040090 CDS
T08565
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aup
Aureispira anguillae
Pathway
aup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AsAng_0040090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aup03019
]
AsAng_0040090
03400 DNA repair and recombination proteins [BR:
aup03400
]
AsAng_0040090
Enzymes [BR:
aup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AsAng_0040090
Messenger RNA biogenesis [BR:
aup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AsAng_0040090
DNA repair and recombination proteins [BR:
aup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AsAng_0040090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
SNF2-rel_dom
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
BDS13279
UniProt:
A0A915YHU7
LinkDB
All DBs
Position
4679602..4681869
Genome browser
AA seq
755 aa
AA seq
DB search
MSLLEKKTDTTNNKKLFLSMETENISLHDSLKKFFGFSKFKGTQQEVIESILGGHDTFVI
MPTGGGKSLCYQLPALMVEGTALVISPLIALMKNQVDSIRSFADSDSIAHFLNSSLTRTQ
IKTVKKDITEGRTKLLYVAPETLTKEENLAFFANNNISFIAIDEAHCISEWGHDFRPEYR
RIRSMIEAMNKQIPIIALTATATPKVRLDIVKTLRMTDHNEFVSSFNRDNLYYEIRPKAK
QDDVLKNIVQFVKSMDGKSGIIYVQSRKATEEIAKLLNVNDINAAPYHAGLEAKVRSDTQ
DKFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSIENYYQETGRAGRDGLEGKCIAY
YSHKDILRLEKFLRDKPVSEREMGSQLLSEIIAYSETSSCRRRFLLHYFGEEYQDESCSK
DKMCDNCKYPRETIEAKQDVQLALRTVEQLLENCHIKEIVDFIIANKTKNILDFKYDKLS
LFGAGKEKDAHYWNSILRQSLLNNLLLKDIETYGIIKLTAAGRAFIEQPTSFKIALNHDF
IKEAEEAEEAAEAANTSVLDKTLFKILMAVRKKVAQQKNVPPFVVFQEPSLEEMATRYPL
SIEEMKNISGVSEGKARRYGREFIKSIQKYVEDNDIIRPVDFVIKSVAKKSKNKVTIIQS
IDKKIPFEDIAETLGLSMEDLLHEMYMIVNSGTKLDINYYTEEMIDEEIFEEIIEYFMEA
ESDSLDLALEELEEDDISMEEIALVRLTFLSDTAN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtctctattggaaaaaaaaacagacacaacaaacaacaagaaactctttttgagtatg
gaaacagaaaatataagcttgcatgattcattgaaaaaattctttggtttcagcaaattt
aaaggcacccaacaagaagtcattgaaagcatcttaggaggtcatgacacttttgttatt
atgcctactggtggaggtaaatcgttatgttatcaacttcctgcattaatggttgaaggg
acagcactcgttatttctccattgattgcacttatgaaaaaccaagtagattctattcgc
tcttttgcggattccgattctattgctcattttttgaactcatccttgacccgtactcaa
attaagacggtcaaaaaagatattacagaggggcgtaccaagttgctttatgtagctcca
gagacgttaactaaagaggaaaatttagccttctttgccaacaacaatatttcgtttatt
gccatagacgaagcgcattgtatctctgaatgggggcatgattttcgtcctgaataccgt
cgtatccgctctatgattgaggcgatgaacaagcaaattccaatcattgccttaaccgct
actgcaactcctaaagttcgtttagatattgtcaaaacattgcgaatgacagatcataac
gagtttgtatcttcttttaatagagataatctatactatgaaattcgtcctaaagcaaaa
caagatgatgttctaaaaaacattgttcagtttgtcaaaagcatggatggaaaatctgga
attatctacgttcaaagtagaaaggcaaccgaagaaattgctaaattactcaatgtgaat
gatattaatgcggctccttatcatgcaggcttagaagctaaagtacgtagtgatactcag
gacaagtttttaatggaaaacattgacgttattgtcgctaccattgcttttggaatggga
attgacaaacctgatgttcgttttgttatacattatgatattccaaaaagtattgagaat
tattatcaagaaacaggaagagcaggacgtgatggtttagagggaaaatgtattgcctat
tattctcacaaagacattttgcgcttagaaaagtttttgcgagacaaacctgtttcggaa
cgagaaatgggtagccaattactttctgaaattattgcttattcggagacttcttcttgt
agaaggcgttttttattgcattattttggagaagagtaccaagatgagagctgtagcaaa
gacaaaatgtgcgacaactgcaaatatcctcgtgaaaccattgaggcaaaacaagacgta
cagttggcactgagaacagtagagcaattgttagaaaactgccacatcaaggaaatcgta
gattttattattgccaataaaaccaaaaatattttagattttaaatacgataaattgtct
ttatttggggctgggaaagaaaaagatgcgcattattggaactctattttgcgacaatct
ttactcaataatttgctacttaaagacattgaaacctatggcattatcaagctaactgct
gctggaagggcctttattgagcaacctacttctttcaaaattgctcttaatcatgacttt
atcaaagaagcagaagaggcagaagaagccgcagaagcagccaatacatctgtacttgac
aaaacgttatttaagatattaatggctgttcgcaaaaaggtagctcaacaaaaaaatgtc
cctccttttgtcgtcttccaagaaccttctttagaagaaatggcaactcgctatccactc
tctattgaggaaatgaaaaacatatcgggggttagtgaaggaaaggctcgaagatatgga
cgagaatttattaagtccatccaaaaatatgttgaagacaatgacattattcgccctgtt
gattttgtcatcaagtccgtcgccaaaaaatctaagaataaggtaacgatcattcaaagc
attgataaaaaaatcccctttgaggacattgctgaaaccttgggattgtctatggaggat
ttgctgcacgaaatgtatatgattgttaattcagggacaaaactcgatattaactattat
accgaagaaatgattgatgaggagatttttgaggagattattgagtattttatggaggca
gaatcagattctttggacctagcgttagaagaactagaagaagacgatatatcaatggaa
gagatcgctttggtgcgtttaacttttttgtcagacacagccaattag
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