Aerococcus sp. Group 1: HMPREF9243_0338
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Entry
HMPREF9243_0338 CDS
T01447
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
aur
Aerococcus sp. Group 1
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_0338 (sbcD)
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF9243_0338 (sbcD)
Archaeal homologous recombinant proteins
HMPREF9243_0338 (sbcD)
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
AEA01889
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All DBs
Position
328092..329258
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AA seq
388 aa
AA seq
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MKIIHTSDWHIGKIVNDRSMLADQKVVLHQLIDEFKALEPDLVIIAGDFYDRSLPSRDSV
RLANDLIDRMMVELTCPVAIIAGNHDAGERIAYGARAYERQNVHLAGLPQKQPQTVELDG
ARVYLLPYADYQVIRELYQDPTIDSLEKAAAKQVQAIKDQESFDPERLNLIVYHGYVTSS
SLEEAGADLEESESERPLSIGTTEYVPSRVFQDFDYVALGHLHGAQRVKGEQVRYSGSPL
KYSKSEAHHHKQYLEVDLTKESIQVTKHMIQPQHDVCVIKTSFDQALTGQSDDYIYFELT
DQTPVHDGMNRLRDNYPNIMNLEYVNIGQVSAQLEGKISKDKLSHQVADPLELFADFYQE
TLGQTLTETQNQAVEAAWLAAQKDQEAD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatccatacttccgactggcatattgggaagattgttaatgaccggtccatg
ttggctgaccagaaagtggtcctccaccagctgattgacgagttcaaggcgcttgagccg
gacttggtaattatcgcgggcgacttttacgaccgctcgcttcccagccgcgatagcgtc
cgcttggccaatgacttgattgaccggatgatggtggagttaacatgcccggtggccatt
attgctggtaaccacgatgctggcgaacggattgcctatggggcgcgggcctatgaacgc
caaaatgttcatctggcgggtttgccacaaaaacagcctcaaaccgttgaattagacggc
gcccgggtctatctccttccctatgccgactaccaggtcatccgggagctctaccaggat
ccgaccattgacagcttggaaaaggccgcagccaaacaggtccaagccatcaaggaccag
gaatcctttgatcctgaacgcctgaatttgattgtctaccacggctatgtgacctcctct
agcctggaggaagctggggctgacttagaagaatcggagtcggagcggcccttaagtatt
gggaccaccgaatatgtgcctagccgagtctttcaagactttgactatgtggctttgggt
cacttgcacggggctcagcgggtcaagggcgaacaggtccgctatagtggcagtccgctc
aagtactccaagtcggaagcccaccaccataagcagtatttggaggtggatttgaccaag
gaatcaatccaggtcaccaagcatatgatccagccccaacatgatgtctgcgtgattaaa
acgagttttgaccaggccttaacggggcagtcggatgactatatttactttgaactgact
gaccagaccccggttcatgacgggatgaatcggctgcgggataattatcccaatattatg
aacctggaatacgtgaatattggccaggtcagcgcccagcttgagggaaaaatcagtaaa
gataagcttagtcatcaagtggctgaccccttagagctcttcgccgacttctaccaagaa
accctgggccagactttgactgaaacgcaaaatcaggcggtggaggcggcctggttagcg
gcccaaaaagaccaggaagctgactag
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