Aerococcus sp. Group 1: HMPREF9243_0352
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Entry
HMPREF9243_0352 CDS
T01447
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
aur
Aerococcus sp. Group 1
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aur03019
]
HMPREF9243_0352
Messenger RNA biogenesis [BR:
aur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HMPREF9243_0352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_16
AAA_22
DUF2380
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEA00319
UniProt:
F2I6X6
LinkDB
All DBs
Position
352523..353419
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AA seq
298 aa
AA seq
DB search
MSENSELNIVIITGMSGAGKTVALQSFEDMGYFCVDNLPPSLLPTFSELIKKSKDINQVC
LVIDLRSREFFDEFVHALQLLDNNPKIHSQLVYLDTSDAALVARYKESRRNHPLQKGGTI
LEGIQREREELSPVRALSHLTIDTTSITPKELRAALIREFHVSDASGFTIEVMSFGFKYG
IPIDADIVMDVRFLPNPHYIDELRPLTGEDEPVYNYVMDQDDTEIFYQKFVDLLDFTLPL
YEAEGKASLTIAIGCTGGQHRSVALTRRIGQHIMDTTNYTTHISHRDQNKRKGTERNQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatagtgaattaaatattgtaattattacgggaatgagtggggccgggaag
acggttgccttacagagttttgaagatatgggttacttttgtgtggataacttaccgcct
tctctcttaccaactttttccgagctcatcaagaagtccaaagatatcaaccaagtctgt
ttggtgattgacttacggtcacgggaattctttgatgaatttgtccatgccctccaactc
ttggataataaccctaagattcattctcaattggtctacctagataccagtgatgcggcc
ttagtggcgcgttataaggaaagccgccgtaaccatcccttgcaaaagggaggcacgatt
ttagaaggaatccaacgggagcgggaagagttgagtccagttcgggccctttctcacttg
accattgataccacctccatcacgcctaaagaattacgagccgccttgatccgggaattc
catgtctctgatgcctcaggcttcaccatcgaagtcatgtcctttggctttaagtatggg
atccctattgatgctgatatcgtcatggacgtgcgtttcctgccaaacccccactatatc
gacgaattgcgtcccttaactggggaagacgagcccgtttataactatgtgatggaccag
gacgataccgaaattttctaccaaaaatttgtcgaccttttagactttaccctgcccctc
tatgaagccgaagggaaggccagcttgaccatcgccattggctgtaccgggggtcaacac
cggtccgtggctttgacccgccggatcggtcaacatatcatggacacaaccaattacacc
acccatatcagtcaccgtgaccagaacaagcgcaaaggaacggagcgaaatcaatga
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