Aerococcus sp. Group 1: HMPREF9243_0439
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Entry
HMPREF9243_0439 CDS
T01447
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03030
DNA replication
aur03430
Mismatch repair
aur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9243_0439 (holB)
03430 Mismatch repair
HMPREF9243_0439 (holB)
03440 Homologous recombination
HMPREF9243_0439 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aur03032
]
HMPREF9243_0439 (holB)
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_0439 (holB)
Enzymes [BR:
aur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9243_0439 (holB)
DNA replication proteins [BR:
aur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9243_0439 (holB)
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9243_0439 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AEA01893
UniProt:
F2I7C6
LinkDB
All DBs
Position
436551..437588
Genome browser
AA seq
345 aa
AA seq
DB search
MTQAFAIEEKQSQLAQLMRQVVQNGRLAHAYLFEGNAGSGQADMAIFLAAALFCSQEDKP
CGQCDHCQRVIRGDHSDVEWLTKDANSIKIDQIRELKHNLSLTGLEGRVKVFVIEAAETM
TVQAANSLLKFLEEPHQDVYIFLLTNNREAILPTVQSRCQVIHFPSLAVDQAVRLFVDHG
IGKAQAQIIAWLTTDLDSALALNDNQVFHDQCQRLDQWLQLIVARDGRAFTMVATDWMKL
SRSRQDNQLLLQLLTLLLRDCLLIKSQSDQEILDQVLVRPDLKTNRQAKYQAYPEGLFLD
LIKLVTKAQKMIKQNVSPQASLEYFVLEAWNLEKNTYKAEKKCSW
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagcctttgccattgaagaaaaacaaagccaactggcccagttgatgcgccaa
gtggtccagaatggccgtctagcccatgcctatttatttgaggggaatgcgggttctggt
caagccgacatggccatttttttggcagcggctttattttgcagtcaagaagacaagccc
tgtggccaatgtgaccattgtcaacgggtgatccggggtgaccatagtgatgtggaatgg
ctgaccaaggatgcgaacagtattaaaattgaccaaatacgtgagctcaagcacaaccta
tccctgaccggtttagaaggtcgggtcaaggtctttgtaattgaggcagccgaaaccatg
acggtgcaagcggccaattccttgttgaaatttctggaagaaccccaccaagatgtctac
atcttcctcttgaccaataatcgggaggcgatcttaccaactgtccaatcccgctgtcag
gtgatccactttccctccctagcggttgaccaagccgtccgtctctttgttgatcatggc
attggcaaagcccaggcccaaatcattgcctggttgacgacagacttggatagcgccttg
gctctaaatgacaaccaggtcttccatgaccagtgccagcgcctcgaccagtggctccag
ctcattgtggctagagacgggcgcgcctttactatggtagccaccgattggatgaagctc
tcccgcagccgccaggacaaccagctcctcttgcagctcttgacccttttactcagggat
tgtctcttaattaagagtcaaagtgaccaggagattttagaccaggttctcgtccgtccc
gatttgaagactaatcgccaggccaaataccaggcctacccagagggcttatttctggac
ctgataaaattagtgaccaaggcgcaaaaaatgatcaagcaaaatgtcagtccccaggcc
agcttggaatactttgtcctagaagcctggaacttagaaaaaaatacctataaagcagag
aaaaagtgctcctggtaa
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