Aerococcus sp. Group 1: HMPREF9243_0540
Help
Entry
HMPREF9243_0540 CDS
T01447
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aur
Aerococcus sp. Group 1
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aur03016
]
HMPREF9243_0540 (truA)
Enzymes [BR:
aur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HMPREF9243_0540 (truA)
Transfer RNA biogenesis [BR:
aur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF9243_0540 (truA)
Prokaryotic type
HMPREF9243_0540 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AEA00686
UniProt:
F2I822
LinkDB
All DBs
Position
531476..532270
Genome browser
AA seq
264 aa
AA seq
DB search
MPQRYKATIAYDGTPYVGFQVQPNGPSIQAALEKALKLMTKGQEIPVYGSGRTDSGVHAL
GQVVHFDYPSEIETEGLLRALNSILDDAICVKTVEPVEKHFHARYHAQRKAYLYKVSLAP
FVSPFERHYVLHHPYRTDVSRIQAALPALIGAHNFKSFCSTKTDKTVFDREIYRAECQAS
WDGQTLTFYFEGNGFLYNMVRIIVGTCLQIGDGLRPVENLSDLLRIQDRNAAGPTAKAHG
LYLHHVDYPSRAERIAKSEANGFY
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacgctataaagcgacgattgcttatgatggtactccctatgtgggatttcaa
gtccaacccaatggtcccagtatccaagcagccctggaaaaggctctgaaattaatgacg
aagggacaagagattcctgtctatgggtctggccgtaccgattctggtgtccatgcccta
gggcaagtggttcactttgactacccttcagagatcgaaaccgagggcttattacgggct
ttgaatagtatcttagatgacgctatttgtgtgaagacagttgagccggtggaaaaacac
ttccatgcccgctaccatgcccaaagaaaagcctacttatataaggtgtctctagctccc
tttgtttcgccttttgagcgtcactacgttctccaccatccctatcgtactgatgtttct
cggatccaggccgccttgccggccttaataggggcgcataactttaagagcttctgttct
accaagacggataaaaccgtctttgaccgggagatctaccgggcggaatgtcaggcttct
tgggatgggcagactttgactttttattttgagggcaatggttttctctacaatatggtg
cggattattgtggggacctgcttgcagattggcgatggcctgcgtccggtggagaatctc
agtgacttgttaaggattcaagaccggaacgccgcgggccccactgccaaggcacatggt
ctctacttgcaccatgtggactatcccagtcgagcggaacgcattgctaagtcagaggcg
aacggtttctattag
DBGET
integrated database retrieval system
