Aerococcus sp. Group 1: HMPREF9243_0889
Help
Entry
HMPREF9243_0889 CDS
T01447
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03030
DNA replication
aur03430
Mismatch repair
aur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9243_0889
03430 Mismatch repair
HMPREF9243_0889
03440 Homologous recombination
HMPREF9243_0889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aur03032
]
HMPREF9243_0889
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_0889
Enzymes [BR:
aur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9243_0889
DNA replication proteins [BR:
aur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9243_0889
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9243_0889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_B_exo1
Pox_F12L
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEA00846
LinkDB
All DBs
Position
906736..907257
Genome browser
AA seq
173 aa
AA seq
DB search
MTYNIFSQVPSEYVAFDLETTGLGFSSKIIQISAVHFRDGKEIGAFDQLVNPDRPIPAKI
TQLTGISDADVYLSPTIDQVIHDFMAFIKDLPLAGYNSKKFDIPMLRANTGIDLSGLPHM
DVLEMARLSPIRTPNYKLTTVKAHYGIQNRAHDSLNDSRATALILEEFRKGNF
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgacttataatattttttctcaagtccccagtgaatatgttgcctttgacttggagaca
acaggactaggattttccagtaagattattcagatttcagcggtccactttagggatggc
aaggagattggggcctttgaccaattagtcaatcccgaccgtcctattccagctaagatt
acccagctgacgggcatttccgatgcagatgtttatttatcgccgacgatcgaccaggtt
atccatgattttatggcttttattaaggacttgcccctagcaggatataatagtaagaaa
tttgatattcctatgttgcgagctaatactggtattgaccttagtggtttaccccatatg
gacgtcttagaaatggcgcgtttgagtcccattcgcacgccaaattataaactgaccaca
gtcaaagcccattacggcatccaaaatcgggcccacgatagtctcaatgattctcgggcc
actgccttgatcttggaagagtttcgtaaggggaatttctaa
DBGET
integrated database retrieval system
