Aerococcus sp. Group 1: HMPREF9243_0964
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Entry
HMPREF9243_0964 CDS
T01447
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF9243_0964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_0964
Enzymes [BR:
aur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HMPREF9243_0964
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF9243_0964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD_C
CodY
UvrD-helicase
nSTAND3
AAA_28
HHH_5
AAA_12
T2SSE
NPHP3_N
AAA_25
AAA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AEA01235
UniProt:
F2I4K5
LinkDB
All DBs
Position
997856..1000321
Genome browser
AA seq
821 aa
AA seq
DB search
MAATEDYFIGEVEATFFSNPDNYYRVMRITVDDTNTLYSEKNIVVTGNFGTIQDGTTYQF
FGNLVDHPKYGVQFKVSHYEGIKITSKDGLIKYLSSDEFPGIGKILAERVVNTLGEKTID
LIVNQPERLKEVKGLTKNKQQMLHEKVKANRGNEDTFIQLSEMGFSNHLAGKIYAKYQDE
AVELIKENPYFLVKNIQGFGFQKADLLAQRLDFAYDSPLRIQGAITFSLETICYSNGDTY
VKKEELFHQVLNLLNKSQMNLQMVDMQQVADSLSDLVDTNEVIATEEGYFLPSLYYAEKG
IVKRLKRIKNERTQPKYENDNLANEIEETEAKLGIQYGPAQRKAIIEALEEKLFILTGGP
GTGKTTVLEGIIDIYCRLNNIRLGDYDPSDFPIRLAAPTGRAAKRMSETTGLVATTIHRL
IGLTGEEDENNIITSDKETIEGDLLIIDEMSMVDTWLFFQLLEAVPDDMQIILVGDKDQL
PSVGPGQVLSDLLRSQTITWRELDEIFRQDANSTITLLAHDIKNGQMPVDLTQNKADRSF
FRVDYFHLADFIAAVAKRALEKDYDVKDIQVLAPMYKGQAGIDQINQKLQESLNPNTDGS
KRQLSHFNRLFRLGDKVLQLQNHAEMNVFNGDMGEIVAIFFAKETTSQSDEIVVDFDGNE
VTYNRQDFNQLTLAYCVSIHKSQGSEFPIVILPLISQYQRMLQRNLLYTAITRAKQSLIL
CGEVQAFQSAIQTQASQRHTNLYRSLLEEDELLPKLNSQPSEVSPSQDQSTRSQGDESGG
QQGDLENSGMNVKVDWLTPALLESGQIDPLIGMDGISPYDF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacagaagattatttcatcggcgaggttgaagctacctttttttctaatcca
gataattattatcgggtgatgcggattacggttgatgataccaacaccctttactccgaa
aaaaatattgtcgtgactggaaattttgggactattcaagacggaaccacataccaattc
ttcggtaacttggttgaccatcctaagtacggggtacaatttaaagtctctcattatgaa
gggataaaaattaccagtaaagatggattaatcaaatatttatccagtgatgaattccct
ggaattggaaaaatactggctgaacgtgtggtcaataccttaggtgagaagaccattgac
ttaattgtaaatcaacccgaacgtttgaaagaagttaagggcctgacgaaaaataaacag
caaatgctacatgagaaagtaaaggctaatcgtggcaatgaggatacctttattcaatta
tcggagatgggtttttccaaccatttagcagggaagatctatgctaaataccaagatgaa
gcggttgaattgattaaagaaaacccctatttcttggttaaaaatattcagggttttggt
tttcaaaaggctgatttactggctcaacgtttagactttgcctatgactcgcctttacgc
atccaaggggcgattactttttcattagaaacaatttgttatagcaatggggatacttat
gttaagaaggaagaactattccaccaggttctcaatctattaaataaaagccaaatgaat
ctacaaatggttgacatgcagcaagtggctgatagcttgagcgacttggtagataccaat
gaagtgattgcgactgaagagggttattttcttcctagtctctattatgcagagaagggg
attgttaaacgtttaaaacgtatcaagaatgaaagaactcagcctaaatatgagaatgat
aatttggctaatgaaatagaggaaaccgaagcaaaattaggtattcaatatggacccgct
caaaggaaggcaattatcgaagccctagaagagaaattatttattcttaccgggggaccg
ggtacgggaaaaaccaccgttttagaagggatcattgatatttattgccggttaaataat
atccgcctaggggattatgatccaagtgactttcctattcgtttggcagcaccaactgga
cgcgctgccaagcggatgagtgaaactactggcctagtagcaaccactattcaccgttta
ataggtctcaccggtgaagaagatgaaaataatatcataacttctgataaagagactatt
gaaggggacttactgattattgatgaaatgtccatggtagatacctggttattctttcag
ttattagaagcggttcctgatgatatgcaaattatcttggtaggggataaagatcaactg
ccctcagttggtccaggacaagtgctttctgacctcttgagaagtcagacaatcacctgg
cgtgagctcgacgaaatatttcgtcaagatgctaattcaactatcactctattggctcat
gatataaaaaatgggcaaatgccagtcgatctgacccaaaataaggctgatcggtcattt
ttccgggtggattatttccacttagctgattttatcgcagcggtggctaaacgcgctctt
gaaaaagattatgatgttaaagatattcaagttttagctcccatgtataagggtcaggcc
ggcatcgatcagattaaccagaaattgcaggaaagcttaaatccaaatactgatggaagt
aagcgccaacttagccacttcaaccgtctttttcgcttaggtgataaggtcttacagttg
caaaatcatgctgaaatgaatgtttttaacggggatatgggagaaatcgtggcgatattc
tttgccaaggaaacgaccagccaaagcgatgaaatagtggttgatttcgacggcaatgag
gtcacatacaaccggcaagattttaaccagttaaccttggcgtattgcgtctcaattcat
aaatcgcagggaagcgaatttcctatcgttatcctccccttaatcagccaataccaacgc
atgttgcaacgcaatttgctctatacagcgatcaccagagctaagcaatccttaattctc
tgcggtgaagtccaagccttccaatctgccattcaaacccaggccagccaacgccatact
aacctttaccgctccctacttgaagaagacgaattacttcctaaactgaactcgcagcca
agtgaagtaagtcctagtcaggatcaaagtaccaggtctcaaggagatgagtcagggggc
caacaaggggatcttgaaaactcgggaatgaatgtaaaagtcgattggttaactcctgcc
ttacttgaaagtggtcagatcgatcctttaattggtatggatggcatcagcccctatgat
ttttaa
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