Aerococcus sp. Group 1: HMPREF9243_1145
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Entry
HMPREF9243_1145 CDS
T01447
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03030
DNA replication
aur03430
Mismatch repair
aur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9243_1145 (polC)
03430 Mismatch repair
HMPREF9243_1145 (polC)
03440 Homologous recombination
HMPREF9243_1145 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aur03032
]
HMPREF9243_1145 (polC)
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_1145 (polC)
Enzymes [BR:
aur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9243_1145 (polC)
DNA replication proteins [BR:
aur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9243_1145 (polC)
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9243_1145 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
RNase_H_2
Rv2179c-like
tRNA_anti-codon
HHH_3
T2SSK
DEDDh_C
YscO-like
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AEA01764
UniProt:
F2I510
LinkDB
All DBs
Position
complement(1177072..1181385)
Genome browser
AA seq
1437 aa
AA seq
DB search
MLSNEEMFQTLLRQMHWQSDDENIKQGSIEEVIVHQVSRCYQFNIRFPERLPFSAYQLFY
AQLTNTFQAIAKVKLKVIISQVSTASDQEVSAYWPVILECLNLSDGMAQQVLYANPPKIN
QGKMFLYVENDPIREYVETNYVQAILDCYQRHGFDKLSLKVIVDQDRANERQEQYQSRRQ
ALEKEEQEKAKLVQERSEQAPSNAKQVKSPDQIRIGRSIPSDQVQMMKSYTEEQRRAVME
GVVFDVEIRELRTGRCILVLKMSDYTSAFIVQKFSNTDADIAIFNSIKEGMWLRVRGDIQ
MDDRFARDLVVNARDLEAIEKEPRQDTMPEDQKRVELHLHTNMSALDATNSVTDFVKQAA
AWGHKAIAVTDHGNVQAFPEASQAAKDTGVKLIYGMEAYVVDDGVPIAYNPGHVELENAT
YVIFDVETTGLSAVYNTIIEIGAVKMHKGNVVGEFSEFLNPGHHLSSFTTELTGITDSMV
ANARPEPEVMQDFLDFCQGTILVAHNASFDVGFIDAAYQRNGLPTIENPVIDTLELARYL
YPHLKSFRLNTLSKHFNVSLEHHHRAIYDATSTGALAWIFVKEAKESHDMVYHDQLNRDI
GQGDAYKKGRPFHATILAKNQKGLKDLFKLVSASNVDYFHRVPRIPRSLLKEHREHLLIG
SACSEGEVFTAAMQKGKETAKKFAEFYDYLEIQPKASYEPLLRNQDIINNEALENIINDL
VDIGDELGITVVATGDAHYLNPEDKIYREILINSIKSNRSKYFPRAHFRTTKEMLDDFAF
LGEEKAFELVVTNSNAIADSIEFVEPIHDKLYTPHIDGAEESIRNDAFTKAHEIYGENLP
ELIEERLERELDSIIGNGFAVIYYIAQKLVWKSNEDGYIVGSRGSVGSSFAATMLGITEV
NPLPPHYVCLNCHYSHFYTHGEIGSGFDLEDKDCPECGQPLSKDGHDIPFETFLGFNGDK
VPDIDLNFSGEYQAQAHNYTKVLFGEDHVYKAGTISTVADKTAFGYVLGYDRDHNLNLRQ
TEKDFLAKGATGVKRTTGQHPGGIIVIPENMDVYDFTPIQYPADEQTADWRTTHFDFHSI
HDNVLKLDCLGHDDPTVIRKLQDLSGIEPTDIPMDDPEVYKLFNGTESLGVSPEQIFSKT
GTLGIPEFGTPFVRQMLEATHPSTFAELLQISGLSHGTDVWLGNAETLVSEKGMELKDVI
GCRDDIMMDLIHMGVPKSDSFQIMEKVRKGKGLSPEHQAIMKEHEVPEWYMDSCQKIKYM
FPKAHAAAYVINALRVAWFKVHHPIWYYCAYLSVRAEDFDLKAMAGGLESNKDRLKEIKA
KGNDASAKEKALQIVLELVNEMWERGLKFKMVDLEKSDAKDFVIEGEDTLIAPFRAVSGL
GVSVAQQVVKAREESPFLSKEDLKIRGKVSQSVIDHLDECNALNGLPEENQLSLFDF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgctttctaacgaagagatgtttcaaactttacttaggcaaatgcattggcagagtgat
gatgaaaatattaagcaagggtctattgaagaggtgattgttcaccaagtctctcgctgc
tatcaattcaatattcgttttccagaacgcttacctttttctgcttatcaacttttttat
gcccagttaaccaatacttttcaagccatagccaaagtaaaattgaaagttattattagt
caagtaagtacagctagtgaccaagaagtgagtgcttattggccggtgattttggaatgc
ttgaatttgtcagatggcatggctcaacaagttttatatgctaatcctcctaaaattaac
caggggaagatgttcctttatgtagaaaatgaccccattcgagaatatgttgaaactaac
tacgtccaggcgatcctggattgctatcagcgccacggcttcgataagctaagtctcaag
gttattgttgatcaagacagggcgaatgagcggcaagagcaataccagtctagacgtcaa
gcgctagagaaggaagaacaagaaaaagccaagcttgtccaggagcgtagtgagcaagcc
ccttcaaatgctaagcaagttaaatctccagatcaaattcgaatcggtcggtctattcct
agtgaccaagttcagatgatgaaaagctatactgaagagcagcgtcgtgctgtaatggag
ggtgttgtttttgatgttgagatacgggaattaagaaccgggcgctgcattcttgtctta
aaaatgtcagattatacctcggcctttattgtacaaaaattctctaatactgacgctgat
attgccatcttcaatagtatcaaggaaggtatgtggctacgtgttcgaggtgatatccaa
atggatgaccgctttgctagagacctcgttgttaatgcacgtgacctggaagccattgaa
aaggaaccacgtcaagataccatgccggaagatcaaaaacgagtagagcttcacttacac
acgaatatgagtgccctggatgctacgaattctgtgactgactttgtcaagcaagcggcc
gcatgggggcacaaagctatcgctgttactgaccatggtaatgtccaggcttttcctgaa
gctagtcaagcagctaaagacactggggtcaagctgatttatggtatggaagcctatgtc
gttgatgatggagtccctattgcctataatcccggccacgttgaattagaaaatgcgact
tatgttatttttgacgtggagacgaccggattatcggcagtttataacacgattattgaa
ataggtgcggtaaaaatgcataaaggaaatgtggtcggagaattttctgagttcttaaat
cctggccatcacttatctagttttaccaccgaattgacaggcattaccgacagtatggta
gctaatgcccgtcctgaacccgaagtgatgcaggatttcttggacttctgtcaaggaacg
attttagtcgctcataatgccagctttgacgttggctttattgatgctgcctatcaaaga
aatggcttacctaccatagaaaatccagtgattgataccttggaactagctcgctacctt
tacccccatttgaaatctttccgtttaaacaccttgtccaagcattttaacgtctctcta
gaacaccaccaccgggcgatttacgatgcgacttcaacgggtgctttagcatggattttt
gttaaggaagccaaagaatctcatgatatggtttaccatgatcagttgaaccgtgatata
ggtcaaggagatgcctataaaaagggacgccccttccatgcgaccatcttagccaaaaat
caaaaggggcttaaggacttatttaaattagtgagtgcctctaatgttgactattttcac
cgggttccgcgtattcctcgctcgctcctaaaggaacaccgtgagcatctattgattggt
tccgcttgttcagaaggagaagtctttactgctgccatgcagaaaggaaaggaaaccgct
aagaaatttgctgagttttacgattaccttgaaattcaacccaaagcatcttatgagcct
cttttacgtaatcaagatattatcaataatgaggctttagaaaatatcattaacgattta
gtggacattggagatgaacttggtattacagtggtagccacaggagatgcgcattatctt
aatcccgaagataaaatttaccgagaaatcttgatcaattcgataaaatctaaccgctct
aaatattttcctagagcccatttcaggacgaccaaagaaatgctcgatgattttgccttt
ttgggagaagagaaagcctttgaattagtcgtcactaattctaatgccatagctgattct
attgaatttgtggaacctattcacgataagttgtatacaccccatatcgatggtgctgaa
gagtccattcgtaatgatgcttttactaaggctcatgaaatttacggggagaatttacct
gaactgattgaagaaagattagaacgggaattggacagtattattggtaacggttttgcg
gtgatctattacattgcgcaaaagttagtgtggaaatcgaatgaggatggctatattgtt
ggttctcggggttcggtgggctcttcctttgctgccaccatgctaggtatcactgaagtt
aatccccttcctccacactatgtctgtctgaactgccattacagtcatttctatacccat
ggcgaaattggatctggttttgacttagaagataaggattgtcccgaatgtggtcagcca
ttgtctaaggatggtcatgatattccttttgaaaccttcttaggttttaatggagacaag
gttcctgatatcgatcttaacttctccggagaatatcaagctcaagcccacaactatact
aaggtcctttttggggaggaccacgtttataaagccggaaccatctctactgttgctgat
aagaccgcttttggctatgttttaggttatgatcgagatcataatttaaacttaaggcaa
accgaaaaagattttctcgccaaaggggctaccggggtaaaacggacaactggacaacac
ccgggtgggattatcgttattccagaaaacatggatgtttatgattttaccccgatccaa
tatcctgccgatgagcaaactgctgattggcggaccacccactttgatttccattccatt
catgacaatgtcttgaaattagactgtttgggtcacgatgatcctacggttattcgtaaa
ttacaggatctgtcgggaattgagccgacagatattccaatggacgatcccgaagtttat
aaactatttaatggaaccgaatcccttggggtgtctccagagcaaattttttccaaaacc
ggaaccctggggattcctgaatttggtacgccattcgttagacagatgctagaagcgact
caccccagcacttttgccgaattactacaaatttccggtctatctcatggtacggatgtt
tggctggggaatgcggaaactttggttagtgaaaagggcatggaattaaaggatgttatt
ggttgtcgggacgacattatgatggacttgattcatatgggagttcctaagagcgattcc
ttccaaattatggaaaaggtaagaaagggaaaggggctgtcacctgaacaccaagcgatc
atgaaagagcatgaggtaccagaatggtacatggattcctgccaaaaaattaagtatatg
tttcctaaagcccatgcggctgcttatgtgattaatgccttacgagtagcttggttcaaa
gtgcaccatcctatttggtactattgtgcctatctcagtgtcagggctgaagattttgat
ttgaaagccatggcaggaggtttagaatcgaacaaggaccgccttaaagagataaaggct
aaggggaatgatgctagtgccaaagaaaaggccctacaaattgtgctagaattagtcaat
gaaatgtgggaacgtggtttgaaatttaagatggttgatttagaaaaatcagatgccaaa
gactttgttatcgaaggagaggataccttaattgcaccatttcgtgccgtttcaggacta
ggtgtcagtgtggctcaacaggtcgttaaagccagagaagagtctcccttcttatcaaaa
gaagatctgaagatccgtggtaaggtcagccaatcagttatcgatcatttagatgagtgc
aatgcactgaacggcttaccggaagaaaatcaattgtccctatttgatttttaa
DBGET
integrated database retrieval system
