Aerococcus sp. Group 1: HMPREF9243_1357
Help
Entry
HMPREF9243_1357 CDS
T01447
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9243_1357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aur03019
]
HMPREF9243_1357
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_1357
Enzymes [BR:
aur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF9243_1357
Messenger RNA biogenesis [BR:
aur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF9243_1357
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF9243_1357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Pesticin
TniB
VC2046
Toxin_trans
Cas3-like_C_2
AAA_14
TRASH_HVO_1752_C
Motif
Other DBs
NCBI-ProteinID:
AEA01382
UniProt:
F2I5G3
LinkDB
All DBs
Position
complement(1361828..1363306)
Genome browser
AA seq
492 aa
AA seq
DB search
MLEDLLATHFGYQSFRPGQKEILLHLQKRENTIGILPTAGGKSLIYQIYQYLNPGPILLI
SPLLALMEDQVSQLQALGFKASVAITSQLSKQEKNWLLHHLHDFQFIIMSPEMLSQPAVL
RRLRQIAIKLMVIDEAHCISQWGYDFRPEYSALRQFRQALNHPLTLALSGSASQNTLAEI
AQHLFSDWESYQQVQCPLDRPNLFYGQLKLNEKDKFLHLNSLLETLPKPGIIYVHNKMEL
EELYQDLKASSQLKLASYHADKTSEERLQVQEQFQKGHLDAILATSAFGMGINQANVRFV
IHYHAPQSLADYLQESGRCGRDGQEALVLLYSNPQEISRLNYFKEQIDAQAVPFYQGLNQ
AYKWAGFLQSQPFLALEEQIQNLITYFYYNYSPQDKEQIQKDFQNYQKIKKNEIEQMIQY
LTLKSCYRRYLLSHFSKERISTNRFCCSHCQADFEDTATFKEYLTLAPNRLVNPKEKVLK
DWRARLNVLFLS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagatctcttagcgactcactttggttaccagtcttttcgccctgggcaaaag
gaaattttactccacttacagaagcgagaaaacacgattggtattttacctactgctggc
ggcaagtcattgatttatcagatctaccagtatttaaatcccggtcccattttgcttatc
tcccctttgttggcattgatggaagaccaagttagtcagttgcaggcactaggttttaaa
gcaagtgtggcaataactagtcaattaagtaaacaagaaaaaaactggttacttcatcat
ctccatgactttcaatttattattatgtcaccagaaatgctctcccaacccgctgtctta
cggcgcttaaggcaaattgctatcaaactgatggtcattgatgaagcgcactgtatttct
caatggggctatgattttcgcccggagtacagtgccctcagacaatttcgccaagcctta
aatcatcctttaaccctagccctgagcggtagtgctagtcaaaatacactagcagagatt
gcccagcatttgtttagtgattgggaaagctatcagcaagtccaatgccccttggaccgt
cctaatttgttctatggtcaattgaagcttaatgaaaaggacaagtttctccatcttaat
tccttgcttgagaccttaccaaagccgggaatcatttatgtccacaataaaatggagttg
gaagaactttaccaagatttaaaagcgagcagccagctaaagctcgccagctaccatgct
gacaagactagtgaggagcgcttgcaagtccaagagcaatttcaaaagggacatcttgac
gcgattttagccacatctgcttttggcatggggattaaccaggccaatgtacgctttgtt
attcactatcatgctccgcaatcattagctgactatctgcaagagagtggccgatgtggt
cgtgacggccaagaggctttggtattactttattctaatccccaagaaattagccgttta
aattattttaaagagcaaattgacgctcaagctgtgcctttttatcaaggattaaatcag
gcttacaagtgggctggttttttgcaaagtcagcctttcttagcacttgaggagcaaatc
caaaatttaatcacttatttttactataattattcaccgcaggataaggagcagattcag
aaagactttcaaaactatcaaaaaataaagaaaaatgaaatcgaacaaatgattcaatac
ctcaccttaaagagctgttatcgtcgttacttgctaagtcatttttccaaggaaaggata
agtactaatcgcttttgttgctcgcattgtcaggctgactttgaagatacggcaactttt
aaggaatatctgaccttggcccctaatcgcttggtgaatcccaaagaaaaagtgttgaag
gattggcgggcgcgacttaatgtcttatttcttagttag
DBGET
integrated database retrieval system
