Aerococcus sp. Group 1: HMPREF9243_1571
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Entry
HMPREF9243_1571 CDS
T01447
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9243_1571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aur03019
]
HMPREF9243_1571
Messenger RNA biogenesis [BR:
aur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF9243_1571
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_6
DdrB
FPL
Motif
Other DBs
NCBI-ProteinID:
AEA01857
UniProt:
F2I6K3
LinkDB
All DBs
Position
complement(1575686..1577488)
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AA seq
600 aa
AA seq
DB search
MSGISIIPLGGVREDGKNMYLVEVKDKIFILDCGLIFPPDEMLGVDIMIPDFTYVIEHKD
KVAGVFLSHGHADAIGALPYLLKEVNVPVFGTELTIELAKINCKKRGVKNFKDFYVIDDS
NEIDFDDAVVKFFSTTHTVPESLGIAVQTDQGSIVYTGDFKFDLTVGDGYKTSFNRIGEI
ASSGVIALLSDSQHADSYFENTSEEKLEQAILKEVDKASGRVVLATVDSNILRIQQVLNV
ARATNRHVFLSGDQIEEIIDVAIRLNKLTIPSKNLIQPNDNLKNFADDEIIILETGEYGE
ILTNLQAMSKGSHKNIKIQKGDLVLITSSPSVGLETVMADTEDEIYRAGGHALQVLSAYK
SSGHASPKDLEVLIGLFNPDYVVPVSGEYRLLHAHGKIAQSLGYDDDHIFLLEKGDVLKY
EKGKLRLANSVPSENVLVDGSGVGDIGNIVLRDRRILSEDGIFVIVLTISRSQGKILSQP
EIISRGFVFMKESTDLLNASKELVREEVEQALADPKNFDWADLKGKIREVVAKYLYKETN
RRPMVLPVIMESSHRRGKRNFKKENQKNNSNQKNNAKKNNKSNSKNKHNKNHKQKQDAKS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaataagtattattccattgggtggtgttcgtgaagatggtaagaacatgtac
ctggttgaagtcaaggataagatatttatcttggactgtggcctaatcttcccacctgat
gagatgttaggggtcgatatcatgatccctgattttacctatgtcattgaacataaagat
aaggtggctggggttttcctaagtcacggccatgccgatgcgattggggccttgccttat
ctcttaaaagaggtcaatgttcccgtctttgggacggaattgaccattgaactagctaag
attaattgtaagaagcgtggagttaagaatttcaaagacttctacgtgatcgatgattct
aacgagatcgattttgacgatgctgtcgttaaattctttagtacgacccacacggtgcct
gagtccctggggattgcagtgcaaactgatcaaggcagcattgtttatactggggacttc
aaatttgatttgacggttggcgatggttataagaccagctttaaccgcattggcgaaatt
gcttcatctggagtaattgctctcttgagtgattcccaacatgcggattcctattttgag
aatacctcggaagaaaaattggaacaagctattttaaaagaagtggacaaggccagtggt
cgggttgtcttagccacggtggatagtaatattttacggatccaacaagtcttaaatgtg
gcgcgggcaaccaaccgtcatgttttcttatcaggcgaccaaattgaagaaattatcgat
gtggccattcgattgaacaagctcaccattccttccaagaacctgattcagcccaatgat
aatttaaagaacttcgctgatgatgaaattattatcttagagacgggcgaatacggggaa
atcttaaccaatttacaagccatgtccaagggctcgcataagaatattaaaattcaaaag
ggcgacctggtcttgattacttcgagtccatcggtgggcttagagaccgtcatggccgat
actgaagatgagatttaccgggctggtggccatgccttgcaagtcttatcggcttataaa
tccagcggtcatgcatcacccaaggacttagaagtcctgattggtctcttcaatccagac
tatgtggtgcccgtatcaggagaataccgtctcttacacgcccatggcaaaattgctcaa
agcctgggctatgatgatgaccatatctttctacttgaaaagggtgacgttcttaaatac
gagaagggcaaactccgcctagccaactcagttccgtctgagaatgtcttggttgatggg
agtggggttggcgatattggtaatattgtcttacgtgaccgtcgtatcctctcagaagat
gggatttttgtgattgtcttgaccatttcaagaagccagggcaagattctttcccaacct
gaaatcatttcgcggggatttgtctttatgaaggaaagtaccgacctccttaacgccagc
aaggaactggtccgcgaagaggttgagcaggccctagcagatcccaaaaactttgactgg
gccgacttaaagggtaaaattcgcgaagtggtggctaaatacctctataaggaaaccaac
cgccgtcctatggttttaccggtgatcatggaatcatctcaccgtcgtggtaagcgtaat
ttcaagaaagagaaccaaaagaacaattccaaccaaaagaataacgccaagaaaaataat
aaatcgaactcaaaaaacaagcacaataaaaatcacaagcagaaacaagacgcaaaatcc
tag
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integrated database retrieval system
