Aerococcus sp. Group 1: HMPREF9243_1944
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Entry
HMPREF9243_1944 CDS
T01447
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aur
Aerococcus sp. Group 1
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aur03009
]
HMPREF9243_1944 (rumA)
Enzymes [BR:
aur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HMPREF9243_1944 (rumA)
Ribosome biogenesis [BR:
aur03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMPREF9243_1944 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
MTS
PrmA
Cons_hypoth95
Methyltransf_11
PCMT
N6_N4_Mtase
UPF0020
FtsJ
RrnaAD
Methyltransf_12
Methyltransf_32
Methyltransf_4
N6_Mtase
Methyltrans_SAM
TPMT
Motif
Other DBs
NCBI-ProteinID:
AEA00978
UniProt:
F2I8C2
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All DBs
Position
complement(1953473..1954852)
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AA seq
459 aa
AA seq
DB search
MAKKKWQAPVKKNQILDVTITDLTYEGMGVAKIDRYPLFIQNALVGEDCQVKVVKVLKKF
AFAIVLKRYNDADSRVPLRDENGLRTGTMPLQHMAYPAQLAFKRQQVVNSLQKQGLLEKT
QVLETIGMEEPWHYRNKAQIPIGQADGKLYTGFYRKGSHKLVPMTDYQIQLPGIDETLQK
VLAILNQYPISAYDEDSHQGLLRHLIVRQGYYTGQVMLVIVINGKKLPEEEKIVATLKDE
LPDLVSIVINSNQKNTNVIMGQDQRVVYGEDLYEDRMFDLTFRISSKSFFQVNTSQAEKL
YHQALEAADLKGDEVVVDAYCGIGTISLCLAQAAKEVYGVEVVPDAINQARENAQLNGLD
NVTFQAGKAEEVIQDWVQAGLKPDVVVVDPPRKGLAEDFIQSVLEVQPPKIVYVSCNPAT
LARDLAKFVDQGYQLGKVQPVDMFPQTHHVEAVVGLTRN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaaatggcaagcgccagttaaaaagaaccagatactcgatgtcaccatc
actgacctgacttatgaaggcatgggtgtggctaagatcgaccgctaccccctatttatt
caaaatgccctagtgggggaagactgccaggtcaaggtggttaaagtcctgaaaaaattt
gcctttgcgattgttctcaaacgctataatgatgcggacagtcgtgtgcctctccgtgat
gagaatggcctaagaactgggactatgcctctgcaacatatggcttatccggcccagctg
gcctttaaacgccaacaggtggtcaacagcttacaaaaacaaggcctgctggagaaaaca
caagtcttagaaaccattggcatggaagagccttggcactaccgcaataaggcccaaatt
cccattggtcaagcggatggcaagctctatactggcttttaccgcaaggggtcgcataag
ttggttcccatgaccgattatcaaattcagctgccagggattgatgaaaccttacaaaaa
gtgctggctatccttaaccagtatcccatttctgcctatgatgaagacagccaccaaggc
ttactccgccacctgatcgttcgccagggttactatactggccaagtcatgttggtgatt
gtgattaatgggaaaaagcttcctgaagaagagaaaatcgtcgcaacactcaaagacgaa
cttcctgacctagtttctattgtgattaattctaaccagaaaaataccaatgttatcatg
ggccaagaccaacgggtggtctatggcgaggacctttatgaagaccgcatgtttgaccta
accttccggatttcctccaagtccttcttccaggtcaacaccagccaagcggaaaaactc
taccatcaagccctggaagctgctgacctcaagggcgatgaagtagtggtggatgcttat
tgtgggattgggaccatttcactttgcctagcccaagccgctaaagaggtttatggggtc
gaagttgttcctgatgccattaaccaagcccgcgaaaacgctcagctcaatggactggat
aatgtgaccttccaagctggaaaagcagaagaagtcatccaagactgggtccaagcggga
ctcaaacccgatgtcgttgtggttgacccaccacgcaagggtcttgcagaagactttatc
cagtctgtcttagaggtccaaccaccaaaaattgtatacgtttcctgtaatccagccact
ctagcccgtgatttggccaaatttgtcgaccagggttatcaactaggtaaggttcaaccc
gtcgatatgttcccacaaacccaccatgtggaagcggtcgtgggtctgacgcggaactaa
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