Aerococcus sp. Group 1: HMPREF9243_1982
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Entry
HMPREF9243_1982 CDS
T01447
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
aur
Aerococcus sp. Group 1
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_1982 (radA)
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF9243_1982 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
AAA_24
nSTAND_NTPase5
AAA_16
SLFN-g3_helicase
ABC_tran
RecA_N
nSTAND3
AAA_22
Rad51
NTPase_1
AAA_14
Elong_Iki1
AAA
GvpD_P-loop
zf-C2H2_7th_ZNF462
ATPase_2
divDNAB
NPHP3_N
CbiA
AAA_5
MeaB
AAA_30
DUF7129
NACHT
ArsA_ATPase
KTI12
DZR
Motif
Other DBs
NCBI-ProteinID:
AEA00558
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Position
complement(2003037..2004425)
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AA seq
462 aa
AA seq
DB search
MAKKKRKTVYTCQACGYESPQWYGKCPQCGAWNTLEEEVIAGKPIRQAGTEVNQKKAKPE
RLKEVSQAEEKRVKTGLGEFNRVLGGGVVPGSLALIGGDPGIGKSTLLLQVAKQLSDNGG
RVLYVSGEESLHQIKMRADRLGYQDADFFVYAETDLLAIQAAISDTQADFVVIDSIQTMV
HPNNESLAGSVSQVREATGELMHIAKSSGIAIFVVGHVTKEGNIAGPRILEHMVDTVLYL
EGEKHNTFRILRAVKNRFGSTNEIGVFDMKSQGLEEVTNPSQLFLEERLMGANGSAVVAS
MEGTRPILTEIQALLSATAFGNARRTASGLDYSRVTLIMAVLEKRAHLMLQNQDAYLKST
GGVKLDEPAIDLAIAIAVASSYWEKETQASDCFVGEIGLTGEIRRISRINERIQEAEKLG
FKRIFIPYGNLQGLATDSQDIEIIGAKTLTQVLKEVFPPQGR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaagcgaaaaactgtctacacctgccaggcttgtggctatgaatcacct
cagtggtatgggaaatgtccccaatgcggggcttggaataccctggaagaggaagtgatt
gcggggaagcccatccgccaagctgggacagaggtcaatcagaaaaaagccaagcctgaa
cgtctcaaggaagtcagccaggcggaagaaaagcgggtcaagactggcctaggcgagttc
aaccgggtcctcggtggcggggtagtccctgggtctttggccctgattggtggggatccc
ggcattggaaagtcgaccctgctcctccaggtagctaagcaattaagtgataatggtggc
cgggtcctctatgtttccggtgaagaaagtttacatcaaatcaagatgcgggctgaccgc
ctaggctaccaggatgcggacttttttgtttatgccgaaaccgacctcttggctattcaa
gcggctatttcagatacccaagccgactttgtggtgattgactccatccaaaccatggtc
catcctaataatgaatccctggccggcagtgtcagccaggtcagagaagcgactggtgaa
ctcatgcatattgccaaaagttctggaatcgccatctttgtggtcggccatgtgaccaag
gaaggtaatattgccggaccgcggattctcgaacatatggtggacacggtcttgtacttg
gaaggagaaaagcataacaccttccggatcctcagagcggtcaaaaatcgttttggctcg
accaatgaaatcggagtttttgatatgaaaagccagggcctggaagaggtcaccaatccc
agccagctctttttagaagaacggctcatgggggccaatgggtccgctgtggtcgcttcc
atggaaggaacccggccgatcctaaccgaaatccaagccctcttgtcggccacggccttt
ggtaatgcccgtcgcacggccagtggtttggattattcccgggtcactctcattatggcg
gtcttagagaagcgggcccatctcatgctgcagaaccaagacgcctatctcaagtcaacc
ggtggggttaagctcgatgaaccagccattgacctagctattgctatagctgtggcttcc
agttactgggagaaggagacccaggccagcgattgctttgtgggtgagattggcctaacc
ggtgaaattcgccggatttcccggattaatgaacggatccaagaagcggaaaaattagga
tttaaacggatttttatcccctatgggaatctccaaggcctggcgacagatagtcaagac
attgaaattattggtgccaagaccctgacccaagttctcaaagaagtctttccccctcag
gggcgatag
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