Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2: IPK37_00465
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Entry
IPK37_00465 CDS
T07017
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aus
Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2
Brite
KEGG Orthology (KO) [BR:
aus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aus03016
]
IPK37_00465 (truB)
Enzymes [BR:
aus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IPK37_00465 (truB)
Transfer RNA biogenesis [BR:
aus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IPK37_00465 (truB)
Prokaryotic type
IPK37_00465 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Pdase_C33_assoc
Motif
Other DBs
NCBI-ProteinID:
QQS01018
LinkDB
All DBs
Position
complement(99343..100287)
Genome browser
AA seq
314 aa
AA seq
DB search
MARPPDPLVGDGVLLVDKPAGLSSHAVVGACRRICGTRKVGHAGTLDPMATGLLLVGVNR
ATRLLTFLVGCDKAYNATIRLGVSTVTDDAEGEVRAVAPAGHLSDAAIEAAVADLTGDIE
QVPSAVSAIKVDGVRSYARVRGGEEVALAARPVRVDRFLVRRRRDVVLPDGTSSVDLDVT
VDVSSGTYVRALARDLGAALGVGGHLTALRRTRVGCFDVAAAHPLPALEEARRVAPPGAS
GLPMVGPAELTRAVMPGRELDEVDARRLAHGAAPPVSGPFRGLLAAYDPAGRLVAVLEQT
DQKVNVKAVFANDW
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggctcggccgccggatcccctggtgggcgacggcgtcctgctggtcgacaagccggcg
gggctgagtagccacgcggtcgtgggggcctgccggcggatctgcggcacgcgcaaggtc
ggccacgcgggcaccctggacccgatggccacggggttgctgctggtcggggtgaaccgg
gcgacgcgcctgttgacgttcctggtgggctgcgacaaggcgtacaacgccacgatccga
ctcggcgtcagcaccgtcaccgacgacgcggagggcgaggtgcgcgccgtcgccccggcc
gggcacctgtcggacgcggcgatcgaggcggcggtcgccgacctcaccggcgacatcgag
caggtccccagcgccgtgagcgcgatcaaggtcgacggtgtccggtcgtacgcgcgggtg
cgcggcggcgaggaggtggcactggcggcgcggcccgtgcgcgtcgaccggttcctggtg
cgtcgccggcgcgacgtggtgctgccggacggtacgtcgtccgtggacctcgacgtcacc
gtggacgtctcgtccgggacctacgtgcgcgccctggcccgcgacctcggggcggcgctc
ggcgtcggcgggcacctgacggcgctgcggcgcacccgcgtgggctgcttcgacgtggcc
gccgcccaccccctccccgcgctggaggaggcccgccgggtggcgccgcccggcgcctcc
gggctgccgatggtcgggccggcggaattgacgcgggccgtcatgcccggcagagagctc
gacgaggtcgacgcccgccgcctggcgcacggcgccgcgccccccgtgtcgggccccttt
cgtggcctgctggcggcctatgatcccgcgggcaggctcgtcgccgttttggagcaaacg
gaccaaaaggtcaatgtcaaggcggtattcgccaacgattggtaa
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