Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2: IPK37_01865
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Entry
IPK37_01865 CDS
T07017
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aus
Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2
Pathway
aus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPK37_01865 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aus03021
]
IPK37_01865 (rho)
03019 Messenger RNA biogenesis [BR:
aus03019
]
IPK37_01865 (rho)
Transcription machinery [BR:
aus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IPK37_01865 (rho)
Messenger RNA biogenesis [BR:
aus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IPK37_01865 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
S1CSD-TOTE-2
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQS01253
LinkDB
All DBs
Position
complement(402486..404621)
Genome browser
AA seq
711 aa
AA seq
DB search
MTDTTELTLPVEAPKRRGLTTMRLAELQSLAQGMGISGTSGMRKGDLILAIKDRQGGSSP
RSASRAAGTDASSAPQGSDAGRSAGGAGEADAAGVDGTAGAGGPTRRTRRAVAPVSAPDQ
RAEQPAQAGGPEPTGGDAASRPSQASDAGERSEPSQRSDQSEAGQRPDQQGQGDEGQGRR
RSRRERQRDSRYGDRAGQDGSGDQRRDGGQNQGQRDQQGQRDRQDGGQQGQRDQQQQSQR
DQQQGQRERQDGGQQGYRDRQQGDNRQQGDNRQQSDNRQGDNRRFRDDDDGPGGRRRNRQ
RSRDRKRRGTRGGMGEDYSDQLETFSEDDVLVPIAGILDVLDNYAFVRTSGYLPGPNDVY
VPLGIVKKHGLRKGDAVTGAVKAMREGEQLPARQKFNALVRLDTVNGTNPDAARNRVEFS
KLVPLYPQERLRLETESNIHTTRIIDLVSPIGKGQRGLIVSPPKAGKTLILQAIANAITK
NNPEAHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELAIERAKRLVELG
HDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSSALYPPKRFFGAARNIENGGSLTILA
TALVETGSKMDEVIFEEFKGTGNMELRLSRQLADRRIFPAVDVNPSGTRREEILMSPEEL
KLMWKLRRILSALESQAALELLLAQLKKTKHNAEFLMMVQRNSSIKLDDEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccaccgagctcaccctgcctgtcgaggcgcccaagcgccgagggctcacg
accatgcgactggcagagctccagagcctcgcccagggcatgggcatctccggcacctcc
gggatgcgcaagggcgacctcatcctggccatcaaggaccggcagggcggctcctccccg
cggtccgcgtcgcgcgcggcgggcacggacgcgagcagtgctccgcagggctccgacgcc
ggccggtcggcgggcggcgcgggtgaggcggacgcggcgggtgtcgacggtacggcggga
gcgggtggccccactcggcgtacgcgtcgtgcggtcgccccggtcagcgcgccggaccag
cgcgccgagcagccggcgcaggccggcgggcccgagccgacgggcggcgacgctgcgtcg
cgtcccagtcaggcgagcgacgcaggcgaacgaagcgaaccgagccagcggtccgatcag
tcggaggccggccagcgtcccgaccagcaggggcagggcgacgaggggcagggccggcgc
cggtcgcgccgggagcggcagcgggattcgcggtacggcgaccgtgcgggccaggacggc
tccggcgaccagcgccgcgacggcggccagaaccagggccagcgcgatcagcaaggccag
cgcgaccggcaggacggcggccaacagggccagcgcgatcagcaacagcagagtcagcgg
gaccagcaacagggccagcgcgagcggcaggacggcggtcagcagggctaccgcgaccgt
cagcagggcgacaaccgccagcaaggcgataaccgccagcagtcggacaaccggcagggc
gacaaccggcggttccgggacgacgacgacggcccgggcgggcgtcgtcgcaaccggcag
cgcagccgagaccgcaagcgccgcggcacccgcggcggcatgggtgaggactacagcgac
cagctggagaccttctccgaggacgacgtgctcgtcccgatcgcgggcatcctcgacgtg
ctcgacaactacgccttcgtgcggaccagcggctacctgccgggaccgaacgacgtgtac
gtgccgctcggcatcgtcaagaagcacgggctgcgcaagggcgacgcggtgaccggcgcg
gtcaaggccatgcgggagggcgagcagctgccggcgcggcagaagttcaacgccctggtg
cgcctcgacacggtgaacgggaccaacccggacgcggcgcgcaatcgggtcgagttctcc
aagctggtgccgctgtatccgcaggagcggctgcggctggagaccgagtcgaacatccac
acgacccgaatcatcgacctggtcagcccgatcggcaagggccagcgcgggctcatcgtc
agcccgccgaaggccggcaagacgctgatcctgcaggccatcgccaacgcgatcaccaag
aacaaccccgaggcccacctcatggtcgtgctcgtcgacgagcgccccgaggaggtcacg
gacatgcagcgcacggtgaagggcgaggtcatcgcctcgaccttcgaccggccggctgac
gaccacacgacggtcgcggagctggcgatcgagcgcgccaagcgcctggtcgagctgggc
cacgacgtggtcgtgctgctcgactcgatcacccgcctgggtcgggcctacaacctcgcg
gcgcccgcctctggtcgcatcctgtccggtggtgtggactccagcgccctctacccgccg
aagcgattcttcggcgcggcccgcaacatcgagaacggcggctcgctgacgatcctcgcc
acggcgctggtcgagaccggctccaagatggacgaggtgatcttcgaggagttcaagggc
accggcaacatggagctgcggctcagccgccagctcgctgaccggcgcatcttcccggcc
gtcgacgtgaacccgtcggggacgcgccgcgaagagatcctcatgagccccgaggagctc
aagctcatgtggaagctccgccggatcctgtccgcgctggagtcccaggcggcgctggag
ttgctgctggcgcagctcaagaagaccaaacacaacgccgagttcctcatgatggtgcag
cgcaacagcagcatcaagctcgacgacgaggagtga
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