Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2: IPK37_03365
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Entry
IPK37_03365 CDS
T07017
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aus
Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2
Brite
KEGG Orthology (KO) [BR:
aus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aus03032
]
IPK37_03365 (topA)
03400 DNA repair and recombination proteins [BR:
aus03400
]
IPK37_03365 (topA)
Enzymes [BR:
aus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IPK37_03365 (topA)
DNA replication proteins [BR:
aus03032
]
Prokaryotic type
DNA Topoisomerases
IPK37_03365 (topA)
DNA repair and recombination proteins [BR:
aus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IPK37_03365 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QQS01504
LinkDB
All DBs
Position
complement(723287..726373)
Genome browser
AA seq
1028 aa
AA seq
DB search
MTHQLKATRHRWPVSARPEERAEVQSGVWCRGPRASTRRRIRRTWGQNRNRGEVAGSGRR
LVIVESPNKVKNIAAYLGDGFTVEASSGHIRDLPNPSELPPDMKKGPYGKFAVDVANGFD
PYYVVDADKKRRVTELKRALKESDELLLATDEDREGEAIAWHLMEVLKPKVPVKRMVFHE
ITKEAIQRALNETRDLDTRLVDAQETRRILDRLYGYEVSPVLWRKVRQGLSAGRVQSVVT
RMVVERERERMAFVPASYWDVDGTFATQAGYEGTAGGGEAFDARLATLDGARVATGRDFD
DRGALRSVKLVHLDEAAARAVATAAQESTATVTDVAEKPYTRRPYAPFTTSTLQQEAGRK
LRMTSRTAMSVAQRLYEGGYITYMRTDSTTLSESALTAARTQARDMYGAEYVPDKPRRYE
KKVKNAQEAHEAIRPAGDRFRTPAQVAGELRGQEFELYELIWKRTVASQMADARGSTATV
RLGVDLGGATPYGRAEFSASGTVITFRGFLAAYDEGRDEEEAARAAARDEERRLPKVSVG
LGLDVREVRADGHETTPPARYTEASMVAAMEEKGIGRPSTYAATIATIQDRGYVHKRSSA
LIPTWLAFAVTQLLEAHFPQLVDYEFTARMEEDLDEIAGGEQGRVDWLTRFYFGDEATNA
EGLRELVDDLGEIDAREISTIPLGDGMVVRVGRYGPYVEELAPAGVDPATGEVADDAAAA
LADDAAAALADGTVKARRATINDDLAPDEMTPAKARELLEMASDDGRELGLNPTSGRTVV
AKAGRYGPYVTEVLTAQEDELTGKNKPKPKTASLFKSMDLASIDLDTALRLLSLPRIVGA
DAEGQEITAQNGRYGPYLKRGTDSRSLATEDQLFDITLDEALAIYAQPKQRGRAAAKPPL
AQFDADPVSGKPVLVKDGRFGPYVTDGETNATLRRDDDPAELTAQRAYELLADKRAKGPT
TRKRAAKKTTAKKSTAKTTAAKTTATKTAAKTATKSATKTATKTATKTAAKATAKKAAAR
PAPAPSDA
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcaactaaaggcgacccgacatcggtggccggtgagcgcgaggcccgaggag
cgggcggaggttcaatccggcgtatggtgtcggggacctcgcgcgtcaacacggcgacga
atccgccgtacgtgggggcagaacaggaacaggggcgaagtggcagggagtggacgcagg
ctcgtcatcgtcgagtcgccgaacaaggtcaagaacatcgccgcctatctgggcgacgga
ttcaccgtcgaggcctcctccgggcacatccgtgacctgccgaatccctccgaactgcct
cccgacatgaagaagggcccctacggcaagtttgccgtggacgtggccaacggattcgat
ccctattacgtcgtcgacgccgacaagaagcgccgcgtcaccgaactcaagcgggcgctc
aaggaatccgacgagctgctgctcgccaccgatgaggaccgcgagggcgaggccatcgcc
tggcacctcatggaggtgctcaagcccaaggtgccggtcaagcggatggtgttccacgag
atcaccaaggaggccatccagcgggcgctgaacgagacccgcgacctcgacacccgcctg
gtcgacgcgcaggagacccgccgcatcctcgaccggctctacggctacgaggtgtcgccg
gtgctgtggcgcaaggtccgccaggggctgtcggcgggccgcgtgcagtccgtcgtcacc
cggatggtcgtggagcgcgagcgggagcggatggcgttcgtgcccgcgtcgtactgggac
gtcgacggcaccttcgcgacgcaggccggctacgagggtacggcgggcggcggcgaggcc
ttcgacgcccggctggcgaccctcgacggggcgcgggtggccaccggacgcgacttcgac
gaccgcggcgcgctgcgctcggtcaagctcgtccacctcgatgaggcggccgcgcgggcg
gtcgcaacggcggcgcaggagtccaccgcgacggtcacggacgtcgccgagaagccctac
acgcggcggccgtacgcgcccttcaccacctccacgctgcagcaggaggcgggtcgcaag
ctgcggatgacctcccgcacggccatgtccgtggcgcagcggctctacgagggcggctac
atcacctatatgcggaccgactcgaccaccctgtccgagtcggcgctgacggccgcgcgg
acgcaggcgcgggacatgtacggcgccgagtacgtccccgacaagccccgccgctacgag
aagaaggtcaagaacgcgcaggaggcccacgaggcgatccggcccgcgggggatcgattc
cgtacgccggcgcaggtggcgggggagctgcgcggtcaggagttcgagctctacgagctg
atctggaagcgcacggtcgccagccagatggcggacgcccgcggctcgacggcgacggtc
cggctgggggtcgacctgggcggcgcgacgccgtacggtcgcgccgagttcagcgccagc
ggcacggtgatcaccttccgcggcttcctcgcggcgtacgacgagggccgcgacgaggag
gaggccgcccgcgcggcggcccgcgacgaggaacggcggctgccgaaggtcagcgtcgga
ctgggtctggacgtgcgggaggtccgcgccgacgggcacgagacgaccccgccggcgcgc
tacaccgaggcctcgatggtcgccgcgatggaggagaaggggatcgggcggccctcgacg
tacgccgcgaccatcgccaccatccaggaccgcggctatgtgcacaaacgctcctcggcg
ctcatccccacgtggctcgcgttcgcggtgacccagctgctggaggcccatttcccgcag
ctcgtggattacgaattcaccgcgcggatggaggaggacctcgacgagatcgcgggcggc
gagcagggccgtgtcgactggctgacgcggttctacttcggcgacgaggcgaccaacgcc
gaggggctgcgcgagctcgtcgacgacctcggcgagatcgacgcccgggagatctccacg
atcccgctcggcgacgggatggtcgtgcgggtggggcgctacgggccgtacgtcgaagag
ctcgccccggcgggcgtggacccggcgaccggcgaagtcgccgacgacgcggcggcggcc
ctcgccgatgacgcggcggcggcgctcgccgacgggacggtcaaggcgcgccgcgcgacc
atcaacgacgacctcgcgcccgacgagatgaccccggccaaggcccgggaactgctggag
atggcctcggacgacggtcgcgagctgggcctgaacccgaccagcggccggaccgtcgtg
gcgaaggcggggcgttacgggccgtacgtcaccgaggtgctcacggcgcaagaggacgag
ctgaccggcaagaacaagccgaagccgaagacggcgtcgctgttcaagagcatggacctg
gccagcatcgacctcgacacggcgctgcggctcctgtcgctgccccgcatcgtcggcgcg
gacgccgaggggcaggagatcacggcgcagaacgggcggtacgggccgtacctgaagcgg
ggcaccgactcgcggtcgctggccaccgaggaccagctgttcgacatcacgctggacgag
gcgttggcgatctacgcccagccgaagcagcgcggccgggccgcagccaagccgccgctg
gcccagttcgacgccgacccggtgagcggaaagccggtgctggtcaaggacggtcggttc
gggccctacgtgaccgacggcgagaccaacgcgacgctacgccgcgacgacgacccggcc
gagctgacggcgcagcgggcgtacgagctgttggcggacaagcgcgccaagggccccacg
acgcgcaagcgggccgccaagaagacgaccgcgaagaagtccaccgcgaagacgaccgcg
gccaagaccacggcgacaaagacggcagctaagacggccacgaagtcggccacgaagacc
gcgaccaagaccgccacgaagacggcggcgaaggcgacggccaagaaggccgcggcccgc
ccggcgccggcgccgtccgacgcctga
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