Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2: IPK37_13430
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Entry
IPK37_13430 CDS
T07017
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aus
Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2
Pathway
aus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IPK37_13430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aus03021
]
IPK37_13430
03400 DNA repair and recombination proteins [BR:
aus03400
]
IPK37_13430
Enzymes [BR:
aus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IPK37_13430
Transcription machinery [BR:
aus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IPK37_13430
DNA repair and recombination proteins [BR:
aus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IPK37_13430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QQR99951
LinkDB
All DBs
Position
2929744..2930760
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPILSEEAISEARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTIPGVKEDVTELILNIKGLVVSSEHDEPVVMYLRKQGPGVVTAADIAPPAGVEVHN
PDLHIATLNDAAKIEMELTVERGRGYVSAQQNKAGDQEIGRIPVDSIYSPVLAVTYRVEA
TRVEQRTDFDKLIVDVETKNSMAPRDALASAGKTLVELFGLARELNVEAEGIDMGPSPTD
AALAADLALPIEDLDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGAKSIDEVKAK
LVGMGLSLKDSPPGFDPTAIVDRYDEDDDSAFAEDEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcccagcggcccatcctctccgaggaggccatctccgaggcgcgctcccgg
ttcgtcatcgagcccctggagcccggcttcggctacaccctcggcaactccctgcgccgg
acgctcctgtcgagcatccccggcgccgccgtcacgagcatccgcgtcgacggcgtcctg
cacgagttcacgacgatccccggagtcaaggaggacgtcaccgaactcatcctcaacatc
aagggcctcgtcgtctccagcgagcacgacgagcccgtggtcatgtacctgcgcaagcag
ggccccggcgtcgtcaccgccgccgacatcgccccgccggccggggtcgaggtgcacaac
cccgacctgcacatcgccacgctcaacgacgccgccaagattgagatggagctgaccgtc
gagcgcggccgcggctacgtctccgcgcagcagaacaaggccggcgaccaggagatcggc
cggatcccggtcgactccatctattcgccggtgctggccgtgacctaccgggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagacgaagaac
tcgatggccccccgcgacgcgctggcctcggccggcaagacgctggtggagctgttcggg
ctggcccgcgagctcaacgtcgaggccgagggcatcgacatgggcccgtcgccgacggac
gcggcgctcgccgccgacctcgcgctgccgatcgaggacctggacctcacggtgcggtcc
tacaactgcctcaagcgcgagggcatccacacggtcggcgagctcgtcggccgcagcgag
gcggacctgttggacatccgcaacttcggcgccaagtccatcgacgaggtcaaggccaag
ctggtcggcatgggcctgtcgctcaaggacagcccgcccggattcgacccgacggcgatc
gtcgaccggtacgacgaggacgacgactcggcgttcgccgaggacgagcagtactga
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