Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2: IPK37_15705
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Entry
IPK37_15705 CDS
T07017
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aus
Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2
Brite
KEGG Orthology (KO) [BR:
aus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aus03009
]
IPK37_15705 (rimO)
Enzymes [BR:
aus01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IPK37_15705 (rimO)
Ribosome biogenesis [BR:
aus03009
]
Prokaryotic type
ribosomal protein modification factors
IPK37_15705 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
QQS00307
LinkDB
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Position
3438944..3440482
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AA seq
512 aa
AA seq
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MTGSAAQRVPARGSVALITLGCARNEVDSEELAGRLAAQGWQVADDPATADVAVVNTCGF
IEAAKKDSIDAVLEAADLKGSGRTRAVVAVGCLAERYGERLAAELPEADAVLGFDSYADL
STHLTDILDGGHPAAHVPVDRRALLPLTPAARPQAVGAVAVPGHDVPMRPAPDVPSRASA
DVPPFTPGAAPAATLDVLPGAGLGGPRPVRSRLDARPWAPLKIASGCDRRCAFCAIPSFR
GAFVSRQPADIVAEARWLAGQGVREIFLVSENSTSYGKDLGDLRLLERLLPELAQVEGID
RVRVSYLQPAEMRPALVAAIAGTRGVAPYFDLSFQHASEPVLRRMRRFGSAEAFLGLIAG
IRDLAPTAGIRSNVIVGFPGETEEDVEVLASFLEAARLDACGVFAYSDEDGTEAERYAAK
VDTDVIEARHDRITALAEELTAQRAEERWGERVVVLVEGVEDGVPVGRAAHQGPDVDGVC
QLIGEVADVRPGAWVVGEVVSSEGADLVVEVT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatcagcggcgcagcgggtcccggcgcgcggttcggtggcgctgatcaccttg
ggctgcgcgcgcaacgaggtcgactccgaagaactggccgggcgcctggcggcgcagggg
tggcaggtcgccgacgaccccgcgaccgccgatgtcgcggtcgtcaacacctgcggcttc
atcgaggcggccaagaaggactcgatcgacgccgtcctggaggccgcggatctcaagggg
agcggccggacccgcgcggtggtggccgtggggtgtctggcggaacggtacggcgagcgg
ctggccgccgaactgcccgaggcggatgccgtcctggggttcgacagctacgccgacctc
tccacccacctgacggacatcctcgacgggggccatccggccgcccatgtgccggtcgac
cgccgcgccctgctgccgttgaccccggccgcgcggccccaggccgtcggtgccgtggcg
gtgccgggccacgacgtaccgatgcggccggcacccgacgtaccaagccgggcgtctgcc
gacgtcccgccgttcactcccggcgcggccccggctgccaccctcgacgtcctgcctggg
gcagggctcggtgggccgcggcccgtgcgctcccggctggacgcgcgcccgtgggcgccc
ctgaagatcgcctccggctgcgatcggcgctgcgccttctgcgccattccgtcgttccgc
ggcgccttcgtgtcccgccagcccgccgacatcgtggccgaggcccgttggctggctggt
cagggggttcgtgagatcttcctggtcagcgagaactcgacgtcgtacggcaaggacctg
ggcgacctgcggctgctggagcggctgctgcccgagctcgcgcaggtcgaaggcatcgac
cgggtgcgggtgagctacctgcagccggccgagatgcgcccggcgttggtggcggccatc
gcgggcacgcgcggcgtggcgccgtacttcgacctctcgtttcagcacgccagcgagccg
gtgctgcgccggatgcgccggttcgggtcggcggaggcgttcctggggctcatcgccggg
atccgggatctcgcccccaccgcggggatccgctcgaacgtcatcgtcggcttccccggc
gagaccgaggaggacgtcgaggtcctggcaagcttcctggaggcggcgcgcctcgacgcc
tgcggggtgttcgcgtactccgacgaggacgggaccgaggcggaacggtacgccgccaag
gtcgacaccgacgtcatcgaggcccgccacgaccggatcacggcgctggccgaggagctc
accgcccaacgcgccgaggaacgttggggcgagcgggtggtcgtgctggtggagggcgtc
gaggacggcgtgccggtcgggcgtgcagcgcatcagggacccgacgtggacggcgtctgc
caactcatcggcgaggtcgccgacgtgcggcctggcgcctgggtcgtgggcgaggtcgtc
agcagcgaaggcgccgacctcgtcgtggaggtgacgtga
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