Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2: IPK37_17000
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Entry
IPK37_17000 CDS
T07017
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
aus
Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2
Pathway
aus00750
Vitamin B6 metabolism
aus01100
Metabolic pathways
aus01240
Biosynthesis of cofactors
Module
aus_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
aus00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
IPK37_17000 (pdxS)
Enzymes [BR:
aus01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
IPK37_17000 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
NanE
IGPS
TetR_C_27
DHO_dh
Glu_synthase
OmpH
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
QQS00506
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All DBs
Position
3723206..3724123
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AA seq
305 aa
AA seq
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MSDTHHPTAGSAGGTGTTRVKRGMAEMLKGGVIMDVVTAEQARIAEDAGAVAVMALERVP
ADIRAQGGVSRMSDPDMIAGIIEAVSIPVMAKARIGHFVEAQVLQALGVDYIDESEVLTP
ADYENHIDKWAFTVPFVCGSTNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRAMRK
EIRRLQNMAEDELYVAAKELQAPYELVKEVAEAGKLPVVLFTAGGIATPADAAMMMQLGA
EGVFVGSGIFKSGNPAQRAAAIVKATTFYDDPKVIAEVSRGLGEAMVGINVDDIPVPHRL
AERGW
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatacccaccaccccaccgccgggtcggccgggggcaccggcaccacccgcgtc
aagcgcggcatggccgagatgctcaagggcggcgtgatcatggacgtcgtcaccgccgag
caggcccggatcgccgaggacgccggggcggtggccgtgatggcgctggagcgggtgccc
gcggacatccgcgcccagggcggggtctcgcggatgagcgacccggacatgatcgcgggc
atcatcgaggccgtctcgattccggtgatggccaaggcgcgcatcggtcacttcgtcgag
gcccaggtgctgcaggcgctcggggtggactacatcgacgagtccgaggtgctcaccccg
gcggactacgagaaccacatcgacaagtgggccttcaccgtccccttcgtgtgcggctcg
accaacctcggcgaggcgctgcggcgcatcaccgagggcgcggcgatgatccgctcgaag
ggcgaggcgggcaccggggacgtctccaacgccaccacgcacatgcgcgcgatgcgcaag
gagatccgccggctgcagaacatggccgaggacgagctgtacgtcgcagccaaggagctg
caggcgccgtacgagctggtcaaggaggtcgccgaggccggcaagctccccgtggtgctg
ttcaccgccggcgggatcgcgaccccggccgacgccgcgatgatgatgcagctcggcgcc
gaaggggtcttcgtcgggtccggcatcttcaagtccggcaacccggcccagcgggccgcc
gcgatcgtcaaggcgacgaccttctacgacgaccccaaggtcatcgccgaggtgtcccgc
gggctcggtgaggcgatggtcggcatcaacgtcgacgacatcccggtgccgcaccggctg
gccgagcgcggctggtga
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