Aurantimicrobium sp. INA4: AINA4_02000
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Entry
AINA4_02000 CDS
T10136
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aut Aurantimicrobium sp. INA4
Pathway
aut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AINA4_02000 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aut03021
]
AINA4_02000 (rpoA)
03400 DNA repair and recombination proteins [BR:
aut03400
]
AINA4_02000 (rpoA)
Enzymes [BR:
aut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AINA4_02000 (rpoA)
Transcription machinery [BR:
aut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AINA4_02000 (rpoA)
DNA repair and recombination proteins [BR:
aut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AINA4_02000 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BDU10279
LinkDB
All DBs
Position
187502..188494
Genome browser
AA seq
330 aa
AA seq
DB search
MLIAQRPTLSEENISEYRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRLDGVL
HEFSTIPGVKEDATEIILNIKSLVVSSEHDEPITAYLRKQGSGVVTAADISAPAGVEIHN
PELVIATLNDKAKFELELTIERGRGYVSSAQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAITPRDAMASAGRTLTELFGLARELNTAAEGIEIGPAPVD
AVLSSELSIPVEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LIEMGLSLKDSVPGFDGAHFYGGFDDDENI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccacgctttccgaagagaacatctccgaataccgttcacgt
ttcatcattgaaccgcttgaaccaggtttcggttacaccctcggtaactctttgcgtcgt
accctgctctccagcattcctggtgcagcagtaaccagcatccgtcttgatggcgtactc
cacgagttctccaccatccccggtgttaaggaagacgcaactgaaatcatcctgaacatc
aagtctctggttgtttccagcgagcacgacgagcccatcaccgcttacttgcgtaagcag
ggttccggtgttgtcaccgctgcagacatctccgcacctgctggtgttgagatccacaac
cctgagctcgtgatcgcaaccctgaacgacaaggcaaagttcgaactcgaactgaccatc
gagcgtggacgtggatacgtctccagcgctcagaaccgttcagagttctccgaggcaggt
cagattcctgttgactcgatctactctcccgtactcaaggtgacctaccgcgtcgaggca
actcgtgccggtgagcgcactgacttcgaccgtctggttgttgacgtggagaccaagcca
gctatcactcctcgtgacgctatggcttctgctggtcgtaccctgaccgagctgttcggt
ctggcacgcgagctcaacactgctgctgaaggtattgagatcggtcctgcaccagtagac
gcagtcctcagctctgagctgtcgattcctgttgaagacctcgacctctctgttcgttcc
tacaactgcctcaagcgcgaaggcatcaacactgtttctgagctcgtagctctgtctgaa
actcagttgatgaacatccgcaacttcggtcagaagtcggtcgacgaggttcgcgacaag
ctcattgagatgggtctgtctctcaaggattctgtccccggattcgacggagcacacttc
tacggtggcttcgacgacgacgagaacatctaa
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