Aurantimicrobium sp. INA4: AINA4_03000
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Entry
AINA4_03000 CDS
T10136
Symbol
groE_2
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aut Aurantimicrobium sp. INA4
Pathway
aut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AINA4_03000 (groE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aut03019
]
AINA4_03000 (groE_2)
03110 Chaperones and folding catalysts [BR:
aut03110
]
AINA4_03000 (groE_2)
03029 Mitochondrial biogenesis [BR:
aut03029
]
AINA4_03000 (groE_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aut04147
]
AINA4_03000 (groE_2)
Enzymes [BR:
aut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AINA4_03000 (groE_2)
Messenger RNA biogenesis [BR:
aut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AINA4_03000 (groE_2)
Chaperones and folding catalysts [BR:
aut03110
]
Heat shock proteins
HSP60 / Chaperonin
AINA4_03000 (groE_2)
Mitochondrial biogenesis [BR:
aut03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AINA4_03000 (groE_2)
Exosome [BR:
aut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AINA4_03000 (groE_2)
Exosomal proteins of other body fluids (saliva and urine)
AINA4_03000 (groE_2)
Exosomal proteins of breast cancer cells
AINA4_03000 (groE_2)
Exosomal proteins of colorectal cancer cells
AINA4_03000 (groE_2)
Exosomal proteins of bladder cancer cells
AINA4_03000 (groE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
BDU10379
LinkDB
All DBs
Position
286939..288558
Genome browser
AA seq
539 aa
AA seq
DB search
MAKLIAFDEEARRGLERGLNILADTVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVAAVSEELINNAKEVETKEEIAATASISAADPEIGALIAEAIDKVGKEGVVTVEESNA
FGTELELTEGMRFDKGYLSAYFVTDPERQEAVFEDPYILIVNSKVSNIKDLLPIVDKVIQ
TGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIA
EEVGLKLENVELDMLGKARKVVITKDETTIVEGAGDADQIAGRVAQIRAEIDNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQA
GKTAFEKLSLTGDEATGANIVRVAIEAPLRQIALNAGHEPGVVVDKVRSLNIGWGLNAAT
DEYVDLLSAGIIDPAKVTRSALQNAASIAALFLTTEAVVAEKPEKAAPPMGDPSGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactaattgcttttgatgaagaggcacgtcgcggtctagagcgcggtctgaac
atcctcgctgacaccgtcaaggtcacccttggcccacgtggacgcaatgtcgtcctcgag
aagaagtggggcgcccccacgattactaacgatggtgtgtccatcgctaaggaaatcgaa
ctggacgaccccttcgaaaagatcggcgctgagctggtcaaggaagttgccaagaagacc
gatgacgttgctggtgacggaaccaccaccgcaaccgttctcgctcaggcactcgttcgc
gaaggtcttcgcaacgttgctgctggcgcagaccccatctcgctcaagcgcggtatcgag
aaggctgttgcagctgtatctgaggaactgatcaacaacgctaaagaggttgagaccaag
gaagagatcgctgcaactgcttctatctctgcagctgaccccgagatcggtgcactgatc
gctgaagctatcgacaaggttggtaaggaaggtgtggtcaccgttgaggagtccaacgct
ttcggaaccgagctcgagctcaccgaaggtatgcgcttcgacaagggttacctctccgca
tacttcgtcactgacccagagcgtcaggaagcagtcttcgaagacccctacatcctgatt
gtcaacagcaaggtttctaacatcaaggacctgctgcccatcgtggacaaagttattcag
actggtaagcagctgctcatcatcgctgaagacgttgacggtgaagcgctggcaactctg
gttgtcaacaagatccgtggcatcttcaagtctgtagctgtcaaggctccaggcttcggt
gaccgccgcaaggccatgcttcaggacatcgctatcctcaccggtggtcaggttattgct
gaagaggtcggtctcaagctcgagaacgttgaactcgacatgctgggtaaggctcgcaag
gttgttatcaccaaggacgagaccaccatcgttgagggtgctggcgacgcagaccagatt
gctggccgcgtagctcagatccgtgccgagattgacaacactgactccgactacgaccgc
gagaagctccaggagcgcctggctaagctcgccggtggtgttgcagtgatcaaggcaggt
gctgctactgaggttgaactcaaggagcgcaagcaccgcattgaggacgctgtccgcaac
gcgaaggctgctgttgaagagggcatcgtccccggtggtggtgttgcactgatccaggct
ggcaagactgctttcgagaagctctcgctgactggtgacgaagcaaccggtgcgaacatt
gttcgcgtcgctatcgaagcacctcttcgccagattgctctcaacgcaggacacgagccc
ggcgttgtcgtcgacaaggttcgttcactcaacatcggctggggcctcaacgccgcaacc
gacgagtacgttgacctgctctctgctggcatcatcgaccctgcgaaggtaacccgctct
gctctgcagaacgccgcatctatcgcagcactgttcctcaccactgaggcagtagtcgct
gagaagccagagaaggctgctccacctatgggtgacccctccggtggaatggacttctaa
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