Aurantimicrobium sp. INA4: AINA4_05100
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Entry
AINA4_05100 CDS
T10136
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aut Aurantimicrobium sp. INA4
Brite
KEGG Orthology (KO) [BR:
aut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aut03016
]
AINA4_05100 (truB)
Enzymes [BR:
aut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AINA4_05100 (truB)
Transfer RNA biogenesis [BR:
aut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AINA4_05100 (truB)
Prokaryotic type
AINA4_05100 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
PseudoU_synth_2
DUF3945
Motif
Other DBs
NCBI-ProteinID:
BDU10589
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All DBs
Position
512999..513934
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AA seq
311 aa
AA seq
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MPSTSASAPNSILLVDKPQGFTSHDAVARVRRLAGTRKVGHAGTLDPMATGLLIMGLGPS
TRLLTYIVGLSKEYLATIRLGSSSTTDDAEGELLGFAPQAQLSKVTEEEILAGVHSLTGE
IEQVPSSVSAIKVNGKRAYDLARAGESVELKARQVTIYSFEVNNIEFGQDDAGNGFIDVQ
VRVECSSGTYIRALARDLGFKLGVGGHLTALRRTRIGDFHVMDAVDIEMMEGAPRLQKPS
DVARRIFPAIDLNETQALELSQGKRVLLEGYPDSAEPVAAIGPQDRLIGLITVKKNLSRV
VVNFPTETESS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgccatccacatcggcttccgcccccaacagcatcttgttagtcgacaagcctcaaggt
ttcaccagtcatgatgcggttgctcgtgttcgccgcttagccgggactcgaaaggtcggc
catgcgggaacgttagatcccatggctaccggactactcatcatggggcttggtccctct
actcggcttctgacttacatcgtcggtctgagtaaggaatatttagccaccattcgcttg
ggttcctctagcactacagacgatgccgaaggggagcttctcggctttgccccgcaggct
caactgagcaaggtcaccgaggaagaaattcttgccggagttcactcgctaaccggagaa
attgagcaggtacctagttcggtcagtgcgatcaaagttaacggaaaacgcgcctatgac
cttgcccgcgcaggggagagtgttgaacttaaggctcgtcaagtcacgatctactccttc
gaagtcaacaacattgagttcggccaagatgacgctgggaacggtttcatcgatgttcag
gttcgagtcgaatgttcctcaggaacatatattcgtgcccttgctcgtgaccttggtttc
aagttgggagtcggggggcatctcacagcgttgcgcagaacgcgcatcggtgacttccac
gtgatggatgctgtcgatattgagatgatggaaggtgctccgcggttacagaagccttcc
gatgttgcacgaaggatttttcccgcaattgacctgaatgagacccaagctctcgaactg
agccaaggaaagagagttcttcttgaaggctacccagatagtgcagagccggtcgcagcg
ataggcccacaagataggctgattgggctgattacggtgaagaaaaacctctcccgcgtt
gtcgtcaatttccctaccgaaacggaaagttcctag
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