Aurantimicrobium sp. INA4: AINA4_05350
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Entry
AINA4_05350 CDS
T10136
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aut Aurantimicrobium sp. INA4
Pathway
aut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AINA4_05350 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aut03019
]
AINA4_05350 (pnp)
03016 Transfer RNA biogenesis [BR:
aut03016
]
AINA4_05350 (pnp)
Enzymes [BR:
aut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AINA4_05350 (pnp)
Messenger RNA biogenesis [BR:
aut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AINA4_05350 (pnp)
Transfer RNA biogenesis [BR:
aut03016
]
Prokaryotic type
tRNA degradation factors
AINA4_05350 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
BDU10614
LinkDB
All DBs
Position
534709..536958
Genome browser
AA seq
749 aa
AA seq
DB search
MEGPEIKFAEAVIDNGKFGKRVVRFETGRLAQQAQGAVAAYLDEETMLLSATSVSKQPKD
NFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVVTVLSIAPGEFYDALAINASSASTQISGLPFSGPIGGIRMALIDGQWVAFPNVDQLKE
AVFDLVVAGRIVVDKDGKEDVAIMMVEAEATEVSWDLIKAGGIKPDEAIVSQGLEASKPF
LTALIKAQEELARQSAKEVQDYPVFPLYSDELYAAVSELALADLEKVYLIADKIERQNAD
DEVKARVKEAIVAKVEAGELDETALNQFSAAYKSVTKKVVRGRILTEGVRMDGRGLRDIR
ALDAEVQVIPRVHGSAIFQRGETQIMGVTTLNMLKMEQQIDSLSPITSKRYMHHYNFPPY
STGETGRVGTPKRREIGHGFLAERALVPVLPGREEFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLRAPVAGIAMGLVSDEVNGETRYAALTDILGAEDALGDMDFKVAGTSEF
ITAIQLDTKLDGIPASVLTGALTQAKEARTAILAVINAAIDGPDEMAPTAPRVISVQIPV
DKIGELIGPKGKTINTIQDETGATISIEDDGTVYIGATDGPSAEAARAQVNAIANPTNPE
VGEQFLGTVVKLATFGAFVSLLPGKDGLLHISEVRKLAGGKRVENVEDVLSVGQKVLVKI
TKIDDRGKLSLEPVLEGEEGEAAAESDAE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtccagaaatcaaatttgccgaagccgttattgataacggtaagttcggcaag
cgcgtggtccgctttgaaaccggacgtctcgcacagcaggctcagggcgcagttgcggcc
tacctggatgaagaaactatgttgctctctgccacttcggtgagcaagcagcctaaagac
aacttcgacttcttcccactgactgtggatgtagaagagcgtagctacgcagcaggaaag
atccccggttcgttcttccgtcgtgaaggccgtccgtcgactgaggccatcctggtctgt
cgtctgattgaccgcccactgcgcccatccttcgttgatggtctgcgtaacgaggttcag
atcgttgttaccgttctctctattgctcctggtgagttctacgacgcactggccatcaac
gcttcttccgcgtcgacccagatctccggtctgccattctcaggccctatcggtggtatc
cgtatggccctgattgacggccagtgggttgcattccccaacgttgaccagctcaaagag
gccgtcttcgacctcgtcgttgcaggtcgcattgttgtggacaaggatggcaaggaagac
gtcgccatcatgatggttgaggcagaagctaccgaagtgagctgggacctcatcaaggct
ggtggcatcaagcctgacgaggcaatcgtctcgcagggtctcgaagcatcaaagcctttc
ctcactgcattgatcaaggctcaggaggagctcgcacgtcagtcggctaaggaagtacag
gactaccctgtattccctctctactctgacgagctctacgcagcagtgagcgaacttgct
cttgctgacctggagaaggtttacctcatcgcagacaagatcgagcgtcagaatgctgac
gacgaggtcaaagctcgcgtcaaggaagcaattgtggccaaggttgaagcaggcgagctt
gatgagactgctctcaaccagttcagtgccgcatacaagtcggttacgaagaaggttgtt
cgcggacgtatcctcactgagggtgttcgtatggacggccgtggtttgcgcgacatccgt
gccttggatgctgaagttcaggtcatcccacgcgttcacggttcagctatcttccagcgt
ggagagacccagatcatgggtgtcaccacgttgaacatgctgaagatggaacagcagatt
gactcgctgtcaccaatcacctcaaagcgctacatgcaccactacaacttccctccatat
tccaccggtgaaaccggtcgtgtgggaacacctaagcgccgcgaaatcggtcacggattc
ttggccgagcgtgcacttgtgcccgttcttccaggtcgtgaagagttcccttacgccatt
cgccaggtatctgaggctttgggctctaacggctcgacctcgatgggttctgtctgcgca
tcgactctgtcgctgctcaacgctggtgtgccactgcgcgcacctgttgcaggtattgcg
atgggtctcgtctctgacgaggtcaacggtgagacccgctacgcagctctgaccgacatc
cttggtgcagaagatgctctcggcgacatggacttcaaggttgcaggtacttccgaattc
atcaccgcgattcagctcgacaccaagcttgatggcatccctgcctccgtgctgaccggt
gcgctgactcaggctaaggaagctcgtaccgcaatcctcgctgtcatcaacgcagcaatc
gatggtcctgacgagatggcacctactgctcctcgcgtgatcagcgttcagattcctgtc
gacaagatcggtgaactcatcggccctaagggaaagacgattaacaccatccaggacgag
actggtgcaaccatctcgatcgaggatgacggaaccgtctacatcggtgcaaccgatggt
ccttcggctgaggcagctcgcgcacaggttaacgccattgcgaaccccaccaaccctgag
gttggcgagcagttcctcggtaccgtcgtcaagctggcaacctttggcgcgtttgtctcc
ttgcttcctggcaaggacggcctgctgcacatctcagaggtgcgcaagcttgcaggtggc
aagcgtgttgagaacgttgaagacgttctctccgttggccagaaggttctcgtcaagatc
accaagatcgatgaccgcggcaagctttcgctggagcccgttctcgaaggtgaagagggc
gaagcagccgctgaaagcgacgctgagtag
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