Aurantimicrobium sp. INA4: AINA4_07850
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Entry
AINA4_07850 CDS
T10136
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aut Aurantimicrobium sp. INA4
Pathway
aut03030
DNA replication
aut03410
Base excision repair
aut03420
Nucleotide excision repair
aut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AINA4_07850 (polA)
03410 Base excision repair
AINA4_07850 (polA)
03420 Nucleotide excision repair
AINA4_07850 (polA)
03440 Homologous recombination
AINA4_07850 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aut03032
]
AINA4_07850 (polA)
03400 DNA repair and recombination proteins [BR:
aut03400
]
AINA4_07850 (polA)
Enzymes [BR:
aut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AINA4_07850 (polA)
DNA replication proteins [BR:
aut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AINA4_07850 (polA)
DNA repair and recombination proteins [BR:
aut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AINA4_07850 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AINA4_07850 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDU10864
LinkDB
All DBs
Position
complement(800971..803661)
Genome browser
AA seq
896 aa
AA seq
DB search
MVIDGHSLAFRAFYALPVDSFKTADGQHTNAIHGFISMMLNLLAKEKPTHLAVAFDISRF
SFRTREYPEYKGTRGETPPEFIGQVPLLQDALHAMGITTLTKEDFEADDILATLAAQGSA
QNYKVFVVSGDRDTIQLIDDNVTLLYPSKQGVSELTRYDATKVFERYGIQPHQYPEIAAL
VGETSDNLPGVPKVGEKTAVKWINEFGSLDEILRRADEIGGKVGESLREFKDNAIRNRKL
NRLVNDVDLPVGPADLERQPFDVEAIRDVFGRLEFKSLLTRVLSLAGETDVTPRQSAPLP
SAQNNQPALYPLTPSSPVHGAVPPRSQQILDEELAAWLHRASDSSPQGIAVEVEVYASGT
SSIGLATENETVLVPWSPVLADIRPLIDWLAGPTPKIFHGAKEQLKTLSAVGVVVENLGF
DTEIADWVLRPDSTKRELGDLTKLYLNEILPEPDPNQLVPDDSALDVAGRAWFIRRIDEA
IRSTMDAATLALFLEIELPTLTTLAAMELRGITVNKAKLENLSRELGERAEKAKQEAFAV
IGREVNLASPKQLQEVLFDQLGMPKTRATKTGYTTDATALADLQATNPHPFLGLLLEHRD
VTKLKQIVETLIQAIGPDGRIHTTYGQTGTSTGRLSSANPNLQNIPIRTADGRRIREAFE
VGEGFDTLFTADYSQIEMRIMAHFSEDEGLIEAFISGEDLHRFVGARVFGVNPAEVTSEM
RSQVKAMSYGLAYGLSAFGLARQLGIDNSAAKKLMADYFQRFGGVRDYLRSVVEQARAQG
YTQTLFGRRRPFPDLASPNRVLRDNAERAALNAPMQGTAADIMKIAMIGIEQDLQALDLK
SQLLLQVHDELVLEIVESERVQVEKIVVERMSHAAKLRVPLDVQIGLGRNWNDAAH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgatggtcattccctagcattcagggctttttatgccctcccagttgacagt
ttcaaaactgcagatggacaacacacaaatgctattcacggatttatttccatgatgctc
aatctgctggccaaagagaaacctacacatctagcagtagctttcgatatctcccgattc
tctttccgtacccgggaataccccgaatacaaggggacccgtggcgaaacacccccagaa
tttattggtcaggtgccacttcttcaagacgctcttcatgcaatgggcatcaccacactc
accaaagaagatttcgaagctgacgatattttggcaacactcgctgcacagggttctgca
caaaactataaagttttcgtcgtctctggtgatcgagacaccattcaacttattgatgac
aatgtcaccttgctatatccctctaaacaaggagtgtctgaactaacgcgatatgacgct
acaaaagttttcgagcgctacggcattcaacctcatcaatatccagagatagcagcattg
gtcggggagacgagcgataatttgcctggtgtgcccaaggttggtgaaaagactgcagtc
aagtggatcaacgaatttggctctttagatgaaattcttcgtcgtgcagacgagattggt
ggcaaagtcggtgaaagcctcagagagttcaaagacaacgccattagaaatagaaagctc
aacagactcgtcaacgatgttgacctaccggtaggccctgctgacctagaacgtcaacct
ttcgatgttgaagctattagagacgtgttcggtcgtctggaattcaaatctttacttacc
agagtattgagtcttgcaggggaaacagacgttacgcctcgtcaatcagctccacttcca
tctgctcaaaacaaccaaccagctctttatccgctgactccatcatcgcctgttcatggc
gctgttcctccgcgttcccaacagatacttgatgaagaacttgctgcatggctccaccgc
gcctcagattcgtcgccacaaggtatcgcagttgaagttgaggtgtatgcctctggaact
tcatcaattgggctagccactgaaaatgaaacagttctcgttccttggtccccagtgctc
gctgacattagacccttgatagattggctggccggaccaactcccaagatttttcatggt
gctaaagaacaactcaagacattatctgcagttggagttgttgttgagaatcttggcttc
gatacagaaattgccgattgggttttgaggccggattctacgaagagagaacttggcgat
ctaacaaagttatatctcaacgaaattttgcctgagcctgacccaaatcaacttgttcct
gatgattcagcgctagacgttgcgggtcgtgcgtggtttattcgtcgaatcgatgaggcc
attcgttcgactatggatgcggcaacacttgcattgtttttggagatcgagcttccaacg
ttgacaactttggcagccatggaacttcgtggcattaccgtgaacaaagcaaaactggaa
aatctttcacgtgaacttggtgagcgagctgaaaaagccaaacaagaggcatttgcagtt
attggccgcgaagttaaccttgcgtcaccaaaacaattgcaagaagtgttgtttgatcag
ctaggcatgccaaaaacacgtgctacgaaaacgggatacaccaccgatgccactgcatta
gccgaccttcaagctacaaacccgcatccattcttaggtttgctactagaacatcgtgat
gtcaccaagctcaaacaaatagttgaaacactcattcaagctattgggccggatgggcgt
atacacaccacctatggccaaacggggaccagtactgggcgactttcttcggcgaacccc
aatcttcaaaatattccaatccgcacagctgatggccgtcgtattcgcgaagcgtttgag
gtaggggaaggtttcgacaccctattcacggctgactattcacaaatcgaaatgcgaatc
atggcccatttttctgaagatgagggtcttatcgaagcctttatttccggtgaagattta
caccgctttgtaggcgcacgagttttcggtgtcaatccagctgaggttacttcagaaatg
aggagccaggtcaaggcaatgagttatggcctcgcatatggtctcagtgcttttgggtta
gcaagacagcttggtatcgacaacagtgccgctaagaaattgatggcggattacttccaa
cgatttgggggagtgcgcgactacctcagaagtgttgtggaacaagcacgagctcagggc
tacacccaaactctttttgggcgcagaagaccttttccagatcttgctagtccaaatcgt
gtacttcgcgacaatgctgaacgtgccgctctcaacgcacctatgcagggtacggctgca
gacattatgaaaatagcaatgatagggattgaacaagatctccaagcactagacctgaaa
tcacaactattacttcaagttcatgatgaattagttctagaaatcgtggaatctgagcgt
gtacaagttgaaaaaatcgttgttgaaagaatgtcccacgctgccaaattgcgtgttccc
ttagacgttcaaattggtcttggacgcaactggaacgacgctgcccattag
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