Aurantimicrobium sp. INA4: AINA4_08650
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Entry
AINA4_08650 CDS
T10136
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aut Aurantimicrobium sp. INA4
Brite
KEGG Orthology (KO) [BR:
aut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aut03032
]
AINA4_08650
03400 DNA repair and recombination proteins [BR:
aut03400
]
AINA4_08650
Enzymes [BR:
aut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AINA4_08650
DNA replication proteins [BR:
aut03032
]
Prokaryotic type
DNA Topoisomerases
AINA4_08650
DNA repair and recombination proteins [BR:
aut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AINA4_08650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BDU10944
LinkDB
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Position
complement(889275..891356)
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AA seq
693 aa
AA seq
DB search
MSSSEYSARHLSVLEGLEAVRKRPGMYIGTTDSRGLMHCLWEIIDNSVDEALGGFGKSIE
IQLHPDSSVEVRDKARGIPVDVEPKTGLTGVEVVFTKLHAGGKFGSGSYAASGGLHGVGA
SVVNALSERLDVEVDRDGKTWSMSFRRGEPGIFDDSTGISPSNPFTPFEEGSSLTVKGKV
AKGVTGTRVRYWADRQIFTPGATFQTEDLEARARQTAFLVPGLEMHIVDERGPEVLESRF
SYNGGISEFVEYLAPDSAVTDIWRLTGEGQFTETVPVLGPDGNMALSEVERTCGVDIALR
WGTGYETELQTFVNIISTPKGGTHQQGFEQALLKVIRSQVEANARKLKAGNDKVEKDDVL
AGLTAVVTVRLPEPQFEGQTKEVLGTPAVKAIVSSVVNKQLAARLTSSKRDDKTQSALLL
EKIVSEMKSRISARTHKETQRRKNALETSSLPAKLVDCRSNDVEQSELFIVEGDSALGTA
KLARNSEYQALLPIRGKILNVQKASVSDMLNNTECASIIQVIGAGSGRSFDLDSARYGKI
ILMSDADVDGAHIRTLLLTLFFRYMRPLIEAGRVFAAVPPLHRVVVINPGTKPNETIYTY
SETELQSVLAGLAKAGKRYQEPIQRYKGLGEMDADQLATTTMDRSARTLRRVGVEDAAMA
DTVFELLMGNDVGPRRDFIIEGSSGLSRDRIDV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcatctgagtattctgctcgccatttatccgtgcttgaaggattggaagcggtt
cgtaagcgtcccggaatgtacatcggtacaaccgactctcgtgggttaatgcactgttta
tgggaaattatcgacaactcagttgacgaggctttaggcggctttggtaagtccatcgaa
attcaacttcaccctgattccagtgttgaggttcgcgacaaggcgcgtggaattcctgtc
gatgttgagccgaaaacaggcctcaccggtgttgaagttgtctttaccaaactccacgca
ggtggaaaatttggttcggggtcctatgcagcatctggtggtctacatggtgttggagcc
tcagttgtcaacgcactctccgaacgattggacgtcgaagttgaccgcgatggcaagaca
tggagcatgtctttccgccgaggagaaccgggcatctttgatgacagcacaggaatctca
ccctcaaatcccttcacaccttttgaggagggtagttctctcaccgtcaagggcaaggtg
gctaagggcgtgacaggtacccgtgttcgatactgggctgatcgccaaatctttactcca
ggtgccacgttccaaactgaagacttggaagcccgcgctcgacaaacagccttcttggtg
ccgggtctcgagatgcacatcgttgatgagcgtggccctgaagtactcgagtctcgtttt
tcttacaacggtggtatcagcgaatttgttgaatacctcgccccagatagtgcagtcacc
gacatctggaggttgactggagaaggacagttcactgaaaccgtcccggtactgggacca
gatggaaacatggctctttcagaggtcgagcgcacctgtggtgttgatattgctcttcgc
tggggcacaggttacgaaaccgaacttcagacttttgtaaacattatttccactcctaag
ggcggaactcatcagcaaggttttgagcaagcacttctgaaggtgatccgttcccaagta
gaagcaaacgctcgcaagctcaaagcaggtaatgacaaggttgaaaaagatgatgtcctt
gctggattgacagcagtagtcaccgttcgccttcccgaaccacagtttgaaggtcaaacg
aaggaagttttggggacaccagccgtcaaagccattgtttcctctgttgtaaacaaacag
cttgctgcacgccttacgtcgtccaaacgtgacgacaagactcaatccgcgctcttatta
gaaaagattgtttctgagatgaagagtcgcatttcggctcgcactcacaaggaaactcag
cgacgtaagaatgcgctggaaacatcgagccttcctgcaaagctggttgattgccgcagt
aatgatgttgagcaatcagagctgttcattgttgagggtgactctgctttggggactgca
aaacttgcacgcaatagtgagtatcaagctttattgcccattcgtggaaagatcctgaac
gttcaaaaggcttctgtatcagacatgctcaacaacactgaatgcgcctccatcattcag
gttattggcgccggttctggccgcagctttgatttagattcggcacgctatggcaagatc
attttgatgtctgacgctgacgtggatggtgctcatattcgaactcttctactaaccctg
tttttccgttacatgaggcctctgatcgaagccggtcgcgttttcgctgctgttcctcca
cttcacagagttgtcgtgatcaacccgggaacgaagccgaatgagacgatatacacatac
tcggaaacagagttgcaatcagttttggccggtctggcaaaggccgggaaacgttatcag
gaacccatccagcgctataaaggcttgggtgaaatggacgcagatcaacttgctacaaca
accatggatcgttctgccagaacactacgtagagtgggtgttgaggatgcggcaatggca
gatacggtatttgaactgttgatgggaaacgatgttggcccacgacgagatttcattatc
gaaggatcttccggcctttctcgtgaccgaatagacgtctag
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