Aurantimicrobium sp. INA4: AINA4_10560
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Entry
AINA4_10560 CDS
T10136
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aut Aurantimicrobium sp. INA4
Pathway
aut03420
Nucleotide excision repair
aut03430
Mismatch repair
Brite
Enzymes [BR:
aut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AINA4_10560
DNA repair and recombination proteins [BR:
aut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AINA4_10560
MMR (mismatch excision repair)
Other MMR factors
AINA4_10560
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDU11135
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Position
complement(1090779..1093988)
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AA seq
1069 aa
AA seq
DB search
MSEFQISALDLARRLSQPDPTPEQQAIIEAPLEPALVIAGAGSGKTETMANRVVWLIANG
KVNVNEILGMTFTRKAAGELGERIRKRVAKLVAEKIIPLDMDELDQATVTTYNSFANRIY
TQYALLIGRDPDATVLGEAAAWQLARSIAREGTGEVLSDLDKSLDVLTEAILRLSRAIAD
NVSDPVEIVSFARSLDEHTVNMPLDVPGSRKSAAVDAWVKAREVGTTLPVLVDLAVQFSE
AKRRKGLIEYSDQVALALEICHRFNSVVADFRSQFKVVLLDEYQDTSVVQTKLLSMLFAQ
TPVMAVGDPHQSIYGWRGASADNIEQFGAAFGSSVENTKTYSLSTSWRNPVGVLAAANVL
VSPLTAKTQVPVEQLRAKPDAPQGEVELSVTETIYDEAEAVAQWLKERVNEKTTSAMLCR
SLKGIEPFKRALDEHGVPYHVVGLGGLLDEPVIVDLVCTLRVLHDATADSELVRLLTGAR
WAIAPKDIVGLSEISKWMSERDHRQQRLTEEVRTALRNSVVSEDGASLVDALDFVVSAPE
SHSVLEKLSATGLSRIKQAGEQIARLRRRVGVDLRELVTIVQQELLLDIEAVANESAATA
LSSLEAFMEPLSAYVDGEDRATLGGFLSWLKEAERRERLSPQSAPAEPGTVQIMTIHGAK
GLEWDVVAIPRMVKDELPGNRTRAENWVGFGRLPFPFRGDAMHLPVLNWRSATTQVELGE
SYDAFVEEVRVRYDDEQRRLAYVALTRAKHSLLLSASFWATQVAPRPPGIFLQELAAAGI
LGRELPLAPGNEANPLGNEEQTVIWPLDPLGSRRDVVMRAAEAVYSANPATPTPWDSEIE
LLLTERDRKTTTDADIPLPERIPASRFKDFIENPEAVAKSLRRPLPERPYRATSLGTLFH
SWVEQRSVTSSLPDLVDATAFELDGVDELSRVSQDEQTLAQFKRIFEQSQWAHRKPVAVE
LEVNVPFGNSIIICKIDAIYEVEGSNGQRFEIVDWKTGKAPKDAADLELKQFQLALYRMA
YSRWSGVAPENIDAAFYFVAEDTVVRPERIYSESELEERWSSVTGFIPR
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattccagatcagtgcgctcgatttagcacgtcgactaagtcagccggacccc
acaccggaacagcaagccatcatcgaggcgccactcgagccagccctggtaattgccggt
gcgggtagtggcaagactgaaaccatggcgaaccgtgtcgtatggctcatcgccaatggc
aaggtcaacgtcaatgaaatcctcggcatgactttcacccgcaaagcagctggtgagctc
ggcgaacgtattcgcaagcgtgtggcgaagctggtcgctgagaagatcatccctctcgat
atggacgagcttgatcaagccaccgtgacgacctacaactccttcgccaatcggatttac
acgcaatatgcgctgctcattggccgcgaccctgatgccaccgttctcggggaggcagct
gcgtggcagcttgcgcgttcgattgctcgggagggaaccggtgaggtcctatccgacctc
gacaagagcctggatgtactcaccgaagccatcctgcggttatctcgcgccattgctgac
aatgtgtcggatccagttgagattgtgtcctttgcaaggtctctggatgagcacaccgtc
aacatgcctctagacgttccaggaagtcgcaagagtgctgctgttgatgcctgggtcaaa
gcgcgcgaagtgggaacaacccttcctgtacttgtcgaccttgccgttcaattctcagag
gctaaacgacgcaagggcttgatcgagtacagtgaccaagtcgcattggcgttggaaatc
tgtcaccgctttaacagcgttgtcgcagatttccgtagccaattcaaagttgtacttctt
gatgaatatcaagacacctctgttgttcagaccaagcttctcagcatgctgtttgctcag
actcctgtgatggccgtgggcgacccacaccagtccatttatgggtggcgtggagcatca
gctgacaatatcgaacagtttggtgctgcctttggttctagtgttgagaacacaaaaacc
tattcactctcgacaagttggcgaaaccctgtgggtgtcctagcagctgcaaatgtgttg
gtgagtccattgaccgccaagacacaggttcccgtcgaacagcttcgagctaaacctgat
gcaccacagggtgaggttgaacttagtgttaccgaaaccatctatgacgaagcagaagcc
gttgcacagtggttgaaggaacgcgtcaacgaaaagaccacctcagcgatgctctgtcgc
tcactcaaaggcatcgagccgttcaagcgggcactggatgagcacggggttccatatcac
gtggttggtcttggtggattactcgatgaacctgtcatcgttgaccttgtctgcacactg
cgggtgctccatgatgccaccgcagattctgagctcgttcgtcttctgactggtgcacgt
tgggcaatagcacccaaggacatcgtggggttgagtgagatctcgaaatggatgagcgaa
cgagatcaccgtcaacagcgcctcactgaagaagttcgcactgcattgcgtaactcagtg
gtctccgaagatggtgcttctctggttgatgcactggacttcgtcgtcagtgcgccagag
tcacactcggtactcgagaaactttctgctaccggcctctctcgtatcaagcaggcaggg
gaacagattgctcgtttgcgtcgccgcgttggtgtcgatctgcgtgagctggtcactatt
gtgcaacaagaattactcctcgatattgaagcggtagcaaacgaatcagcggcaactgct
ctctcaagccttgaagcgtttatggagccgctgagtgcctatgttgatggcgaagaccga
gctaccctcggcgggttcctgagttggctcaaagaagcagaacgccgagaacgcctcagt
ccgcaatcagctcctgcagaaccgggaacagtccagatcatgactattcacggagctaag
ggcttggagtgggacgtggtggccattccacgcatggtcaaggacgaacttcccggcaat
cgcacacgtgctgaaaactgggttggttttggtcggttgcctttccccttccgcggtgat
gcaatgcacctcccagtcctcaactggcgctctgcaacaacccaggttgagttgggtgaa
agctatgacgctttcgtcgaagaggttcgagtgcgttatgacgacgaacagcgcagattg
gcctatgtggcgctgacgcgagccaagcactcgttgttactctcggcatctttctgggcc
acacaagtcgccccacgacctccaggcatcttcctccaggagttggctgctgcaggcatc
cttggtcgcgagcttcctttagctcctggaaatgaagctaaccctctcggtaacgaggaa
cagacagttatctggccgttggatcctctgggttcccgccgtgatgttgtgatgagggcc
gctgaggcagtgtattcggcgaatcctgccacccccaccccatgggattcggaaattgag
cttctgcttaccgaacgtgaccgcaaaaccactacagatgccgacattccgcttcccgaa
cgtattcctgcttcgcgatttaaagacttcattgaaaaccctgaagcagtagccaaatca
ttacgcagacctttgcctgagcgtccctaccgggcaacaagcttaggaacgctttttcac
tcgtgggtcgaacagcgttcggtgacgagttcacttccagacctggttgatgcaacagct
tttgaacttgatggtgttgatgaactctcacgtgtttcacaagatgagcagactttggcc
cagttcaagcgtatttttgagcaatcacaatgggctcaccgcaaacctgttgccgtggaa
ttagaggtcaacgttcccttcggaaacagcatcatcatttgtaagattgatgcgatctat
gaggttgaaggttcgaacgggcagcgcttcgaaatcgtggattggaagacaggcaaagca
cccaaggatgctgccgacctggaactcaagcaattccagttagccctttatcgcatggcg
tattcacggtggtccggtgtggccccagaaaacattgatgcggctttctacttcgttgcc
gaagataccgtggtcagacccgaacggatttactctgagagtgaattggaagaacgctgg
tcgtcggtgactggtttcattccgcggtaa
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