Aurantimicrobium sp. INA4: AINA4_11190
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Entry
AINA4_11190 CDS
T10136
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aut Aurantimicrobium sp. INA4
Pathway
aut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AINA4_11190 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aut03019
]
AINA4_11190 (rnc)
03009 Ribosome biogenesis [BR:
aut03009
]
AINA4_11190 (rnc)
03036 Chromosome and associated proteins [BR:
aut03036
]
AINA4_11190 (rnc)
Enzymes [BR:
aut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AINA4_11190 (rnc)
Messenger RNA biogenesis [BR:
aut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AINA4_11190 (rnc)
Ribosome biogenesis [BR:
aut03009
]
Eukaryotic type
90S particles
RNase
AINA4_11190 (rnc)
Prokaryotic type
rRNA processing factors
AINA4_11190 (rnc)
Chromosome and associated proteins [BR:
aut03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AINA4_11190 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BDU11198
LinkDB
All DBs
Position
complement(1168821..1169531)
Genome browser
AA seq
236 aa
AA seq
DB search
MSSPASGHLTDISGLSSSLGIPLDGELYELALTHRSYAYEHGGIAHNERLEFLGDAVLGQ
AVTVMLYRNHPDLVEGELAKRRASLVSTIALAEVARGINLGSYIRLGNGEELTGGRNKDS
ILADTVEALFGAAYLTEGPEVANDLVLRLIEPLLKNPERFGAAMDPKTSLQEIAAKLSSD
APVYSVQADGPDHARIFTATVVVGTLVEATGTGTSKKHAEMAAALSAWSTLSENVS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcctgcttctggtcatctgaccgatatctcgggtctctcgagttctcttggt
atacctctggatggggagctctatgagcttgccttgacgcaccgttcttatgcatatgag
cacgggggcatcgcccacaacgaacgattagagttccttggcgatgccgtattgggccaa
gccgtaaccgtgatgctgtatcgcaaccaccctgatttagttgagggggagttggcaaag
cgacgagcatcactggtctcaacgatcgcgttggcagaagttgctcgtggtatcaatctc
ggcagctacattcgactcggtaatggtgaagaactcactggcggtcgcaacaaggattcc
atccttgcagacaccgttgaagcactatttggtgccgcctatctgaccgaaggccccgaa
gttgccaacgatcttgtgctgagattgatcgaacctttgctgaagaatcctgaacgtttt
ggtgcggcaatggatcccaaaaccagtttgcaagaaattgctgccaagcttagttccgat
gctcccgtctattccgtgcaggcggacggacctgatcatgcacgtatctttaccgcaacc
gttgtggtcggaacacttgttgaggcaaccgggacggggacgagcaagaagcacgcagag
atggccgcagcgttgagtgcatggtccactctgagcgagaacgtttcctga
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