Actinotignum urinale: CJ184_001740
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Entry
CJ184_001740 CDS
T09101
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
auu
Actinotignum urinale
Pathway
auu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
auu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ184_001740 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
auu03021
]
CJ184_001740 (rho)
03019 Messenger RNA biogenesis [BR:
auu03019
]
CJ184_001740 (rho)
Transcription machinery [BR:
auu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CJ184_001740 (rho)
Messenger RNA biogenesis [BR:
auu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJ184_001740 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
NACHT
Spore_III_AA
Rho_N
AAA_25
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
WIK59396
LinkDB
All DBs
Position
complement(414830..416800)
Genome browser
AA seq
656 aa
AA seq
DB search
MTQVQTTGPISIMRVSELRALAEELGLKMDPKAKKTELLKAIRAVRPARRGRPRKEDGSE
ETESQEAHNETPKESTNRNAKAPKSADDVKVEEKPTPETDAHAVAQEDNAGEGRVSRRRT
RTRNRNIRRIREESAETESTEEITLPAPKIELPAPKRGADASRTAKTDMSDEDKMAALDA
IGDAAERKAEAEEESGEGTRRVRKNRHNDEERRTRNIRRNRKNDAEETPNVDETETAEEE
NAGEESAQENKRKQEEVLLQVAGIVDIVGKQAFLRTAGYLPGPNDALISQAIMRQYGLRR
GDAVMGAIRQQGEEGQQRNHRNNNRNRNFRRGRFNNNNQSKAGNYLVQVDSINSLSAEEA
AKRPEFNKLTPVYPDEMLRLETVKNGLSTRVIDLVAPIGKGQRGLIVSPPKAGKTMIMQQ
IAKAIAANDPNVHIMVVLVDERPEEVTDMRRLVKGEVIASTFDRPASDHTTVSELAIERA
KRLVELGQDVVVLLDSLTRLSRAYNLAAPASGRILSGGVDAAALYPPKKFFGAARNIENG
GSLTIIASALVETGSKMDEVIFEEFKGTGNMELRLSRQLADRRLFPAVDINASGTRREDM
LYKPEELKVIWQLRRALGTLGVDEAADFVLKRMRNTENNAEFLVSIMRSIQAGNQS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaagtccaaacaacaggtcctatttctattatgcgcgtttcagaattacgtgca
cttgccgaagaactcggccttaagatggatccaaaagctaaaaaaacagaacttcttaaa
gctatccgcgcagtacgccccgcacgccgtggccgtcctcgtaaagaagacggttctgaa
gaaacagaatcacaagaagcccacaacgaaacaccaaaagaatcaaccaaccgcaacgct
aaagctccgaaatctgccgatgatgtcaaggttgaggaaaagccaactccggaaactgat
gcccacgcggtagcacaggaagataacgcgggtgaagggcgcgtcagccgtcgtcgtaca
cgaacacgcaaccgcaatattcgccgtattcgtgaagaatccgctgaaacggaatcaaca
gaagaaattacgcttcccgcacctaaaattgaacttcccgcaccaaaacgcggggcagat
gcctctcgcacagcaaaaaccgacatgagcgacgaagataaaatggcggcgctcgacgcg
attggtgacgcggcagaacggaaagccgaagcggaagaagaaagtggcgaaggaacacgt
cgagttcggaagaatcgccacaacgatgaggaacgccgcacgcgcaatattcgtcgcaat
cggaagaacgatgcggaagaaacaccaaacgttgacgaaacagaaaccgctgaagaagaa
aacgctggtgaagaatccgcgcaagagaacaagcgtaagcaggaagaagtcctccttcaa
gtagcgggtatcgtcgatattgtgggcaagcaggcgttcttgcgcacggctggatatttg
cccggccccaacgatgcgcttatttctcaggcaattatgcgccaatacggtttgcgcagg
ggagatgcggttatgggcgcgattcgccaacagggcgaagaagggcagcaacgcaaccac
cgcaacaataaccgtaaccgtaacttccgcaggggacgtttcaacaacaataatcaatcg
aaggcaggaaactacctcgtgcaggtggattccattaactccttgagtgctgaggaagcc
gctaagcgtccggaattcaacaagctcacgcccgtgtatcccgacgaaatgttgcgtttg
gaaaccgtgaagaacggcttgtctacgcgcgttattgatttggttgcgccgatcggtaag
gggcagcgcgggcttattgtttcaccgcctaaggccggtaaaacaatgattatgcagcag
attgcgaaggcgattgcggccaatgatccgaacgttcacattatggttgtgcttgtcgat
gagcgtccggaagaagtgacggatatgaggcgccttgtgaagggcgaagttattgcttct
accttcgatcgtcccgcaagcgatcacaccacggtttctgagctggcaattgagcgcgcg
aagcgccttgtggagctcgggcaagatgttgtggttctgcttgattccttgacgcgcctt
tcgcgtgcctataatcttgcggcacctgcctccgggcgtatcctttccggtggtgtggat
gctgctgcgctctacccgcccaagaagttcttcggggctgcgcgcaatattgaaaacggt
ggttcgttgacgattattgcgtccgcgctggtagaaaccggatccaagatggatgaggtt
attttcgaagaattcaagggtacgggcaatatggaattgcggctttcgcgccagctggct
gatcgccgtctcttcccggcagtggatattaacgcctccggtacgcgtcgcgaagacatg
ctctacaagccagaagagctcaaggttatttggcagcttcgccgggcgctgggcactctc
ggcgtggatgaagccgctgatttcgtgctcaagcgtatgcgtaataccgaaaataatgca
gagtttttggtgtctatcatgcgctctatccaggcaggtaaccaaagctag
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