Actinotignum urinale: CJ184_001920
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Entry
CJ184_001920 CDS
T09101
Name
(GenBank) AAA family ATPase
KO
K04485
DNA repair protein RadA/Sms
Organism
auu
Actinotignum urinale
Brite
KEGG Orthology (KO) [BR:
auu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auu03400
]
CJ184_001920
DNA repair and recombination proteins [BR:
auu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CJ184_001920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Lon_C
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA
AAA_22
AAA_16
RsgA_GTPase
ABC_tran
DUF7129
NTPase_1
nSTAND3
AAA_29
PAXNEB
NACHT
Rad51
AAA_18
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WIK59431
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Position
458161..459669
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AA seq
502 aa
AA seq
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MAKTPVTTYTCQECGWATTKWVGRCSQCGGWGTVDEVNTVGASSGTSALTPRSPALPITD
VPATASTKTPTGVDELDRVLGGGLVPGAVILLAGEPGVGKSTLLLDVAAKTADALREASE
RSSTDNRAYSEGKNNAPRGENRSSQRSVTGNGRSNSVVPSVGNVLYISGEESASQVRLRA
ERIGAMNSNLFLASESDLARVLGHIEAQNPSLVIVDSVQTISDSRIDGVAGGSAQVKAVT
SALVHVAKTRGLPVLLVGHVTKDGSIAGPRVLEHLVDVVCQFEGDKHSRLRMVRAVKNRY
GATDEVGCFELVDHGIIGLPDPSGLFLSARNRSVPGTCASMSLDGRRPIPVELQGLVVQS
SGRPQRTNSGVNSSRVAMIVAILQSRLGLALEQKDIFVSTVGGAQANEPSADIAIALALA
SAYVDLPVAPGVIAIGEVALTGELRPVTGLQQRLAEATRLGFTLALIPQSHEKIQPPEGL
KIRTCSDIKEATQAVLPLSLQP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaccggtaacaacatacacgtgtcaggaatgtggctgggctacaactaaa
tgggttgggcgctgttcgcagtgtggcggatggggaactgttgatgaggttaacactgtt
ggggcaagctcgggcacctcggcattaacgccacgtagccctgcattacctattacagat
gttccagcaaccgcgtctacaaaaactccaaccggggtggatgaactggatcgagttttg
ggtggcgggcttgttccgggcgcggtgattttgttggctggtgagccaggtgttggaaaa
tctacgcttttgctggatgttgcggcgaaaacggcagatgctcttcgtgaagcctccgaa
agaagctctacggataatcgggcatactctgagggcaagaacaatgctcctaggggtgaa
aatcgctcctcccaacgtagcgtcaccggaaacggaaggagcaactccgtcgtaccatct
gtcggtaacgttctctatatttccggggaggaatctgcctcccaggttcggcttcgtgcg
gaacgcattggagcaatgaattcgaatcttttccttgcatctgaaagtgatcttgccagg
gttcttgggcatattgaagcccagaatccttcgctagttattgttgattctgttcaaacc
atatcggactcacgaattgatggtgttgccggcggtagtgcccaggtaaaagctgttaca
tccgccctcgtccacgtggcgaaaacacgcgggcttccggtgctgctcgtcgggcacgtc
accaaagatggatctattgccgggccgcgggttttggaacatttagtggatgttgtctgc
caattcgaaggggataaacattcacgtttgcgcatggttcgggccgtcaagaatcgttac
ggtgcaacagacgaagtcggctgttttgaactggttgatcacggaattatcggtttgccc
gacccttcgggtcttttcctttccgcacgcaacagaagcgtccctggaacctgcgcatcc
atgtctcttgatggaaggcgcccgattcctgtggaattacaaggcttggttgtgcaatcc
tccggacgtccacaacgcaccaattccggggtgaattcctcgcgcgtcgccatgattgtt
gccatccttcaatcacggctcggtttagctttagaacaaaaagacatctttgtttcaaca
gtgggtggcgctcaagctaacgaaccaagcgcggatatcgcgattgctttagcgttggca
agtgcctacgttgatttgccggtagcgcccggagttattgccataggagaagtcgcactc
accggagaactccgtcctgttactgggctacagcaacgtttagctgaagccacacgattg
ggattcacactcgcgctcatcccccagagccacgaaaaaatacaaccacccgaaggcctc
aaaatacgcacctgctccgatattaaagaagccacgcaagccgtcctgccactatcgctg
caaccctaa
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