Actinotignum urinale: CJ184_002625
Help
Entry
CJ184_002625 CDS
T09101
Name
(GenBank) DEAD/DEAH box helicase
Organism
auu
Actinotignum urinale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
WIK59557
LinkDB
All DBs
Position
642331..645741
Genome browser
AA seq
1136 aa
AA seq
DB search
MQDLRTFSESVSRLSLNEMRYLFTFDDLKKGASLARGNTPMSLNIRGNNLTAEFADSHET
IKTVIRNLHPFNADCTCNTFLNCHHMAAVLIFLGAPVTENSWRTLLTNLRQDFATHSNPE
GKPKPLGLLVSRGQYGELTGKLLPVTTKNNGKWARSKLSWPSIMPSTWKSATDQYLPLHL
NALRQLRSVATDHYPWAGGETTLSQLESFAFSELQRCVRAGIQLFVGDSQTPLVLSDKPW
DVQARITSTSESDNFLLRFVPLTPEGRAAEVIPGAKPPLAIGYMNGVATLAEISSSVPPS
ILEKLGVNTVEIPHSELAEFESSILGILPDSIDINSPDGSYAPGIFSAPHLHLHISRHRN
DSSTPGRSSRRLNTTDFYDDDIPGLGARYFSPPTPLMGEKFDLEWQIHRTLESPHTGTRT
VVTPFLDPSQLEEGSAPTVSTKTTTPTSTTQPTNQPEPSANSHSDPLALATKLWEKASLY
GQPNFTGIHTITFDIYTTVRERLLPSFDNTPITYSFDTDADIVVVEKPSSITTRATRRKD
WLELDVVIDVEGTEIPLPIVYEALARGRDYVDYSGLILHLGEDFNSLRRLLLDAAALGEV
KPDSIRIPSARMHALDFAHIEAGRELREKLQHMQDLANPVPVPNTVNAQLRPYQVEGFSW
LTHLARAGMGGLLADDMGLGKTLQLLTMIEEVRSAPANSAPSNTRRKTRQRKGHTSTNAT
TQPPVLVVAPTSVVSTWAQQAEQFTPHLRVETVTAGRKKRGKSLESITHQADVIVTSYAI
ARMDREEYRSLEWGGLIADEAQAIKNPSTVGYKALQMLERPWTFAVTGTPVENSLNDLAA
LLALCTPGLLPSRASFAQNFRKPIEEYGDENTAEILQRLIRPFVMRRRKAEVATDLPPRI
VTDISVDMTPDHAQMYRRRLERERQEVLGLVDNISENRVSILASLTRLRRTAIDPGLYEE
KTRVKSAKTEFLIEHLRVLLPEGHRVLVFSQFPTYLKRIAKRLREEHISFSYLDGATRNR
DDAIADFKAEDGYSPVFLISLKAGGTGLTLTEADYVFIMDAWWNPAVEEQAIDRAHRIGQ
DKPVNVYRLASKGTIEEKVVALQEHKRNLAELIDAGASGPISAEDVRELLNLPPLY
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatcttcgaacctttagcgaaagcgtttcacgattaagcctcaacgaaatgcgc
taccttttcacttttgacgatcttaaaaaaggggcatctcttgcacggggcaacacgcct
atgtccttaaatattcgtggcaacaacctcactgctgaatttgctgacagccacgaaaca
ataaaaaccgttattcgcaatcttcatcccttcaatgcagattgcacatgcaacacgttc
ttgaactgtcaccacatggcggcggtacttatatttcttggcgcaccggttacggaaaat
tcttggcgcaccctcttgacgaatcttcgtcaagacttcgccacacatagcaatcccgaa
ggaaaaccgaaacccctcggcctgctcgtttcacgaggccaatacggagaactaacagga
aaactcctgcccgtcaccacaaaaaataatggaaaatgggcacgctctaaactctcgtgg
ccttccatcatgccaagcacctggaaaagcgcaaccgaccaataccttccacttcacctt
aacgcactacgccaactgcgctcggtggcaaccgaccattatccgtgggcgggcggggaa
acaacgctatcgcaactcgaatcgtttgctttttccgagttgcaacgttgcgttcgtgca
ggcatacagctctttgtgggagatagtcaaacccctcttgtgttgtccgacaaaccgtgg
gacgtccaggcacgcatcacatcgacaagcgaatccgacaatttcttgcttcgttttgtt
ccgcttactcctgaagggcgcgcggcggaggttattcccggtgccaagccacccctggcg
attgggtacatgaatggcgtggcaacgttagctgaaatatcgtctagcgttccgccctca
attctggagaaacttggggtcaacactgttgagattccgcactcagagctcgcggaattt
gaaagctcgattttaggaattctccccgattctatcgacatcaattctcctgatggcagc
tacgcccccggaatttttagcgcccctcacctacatctgcatatttcgcgccaccgcaat
gattcttcgacacccggtagatcttcccggcgtttgaatactaccgatttttacgacgac
gacattccgggtctcggtgccaggtatttttcaccacccactcctcttatgggggaaaaa
tttgacctcgaatggcagattcaccgcacactggaatcgcctcacacgggaacgcgaaca
gtcgtcacccccttcctcgacccttcgcagttagaagaagggagcgcgcccactgtttcc
acaaaaacaaccacacccacatcaacaactcagcccaccaaccagcccgaacccagcgca
aactcgcattcagatcctttagccctagcaacaaaactgtgggaaaaagcttcactttac
ggacaaccgaactttacgggtatccacaccataactttcgacatctacaccacagtccgg
gaacggcttctcccgagtttcgacaacacccccatcacgtacagtttcgatacggacgcg
gatatcgtcgtcgttgaaaaaccttcctccatcacgacgcgcgccacaaggcgtaaagat
tggctggaactcgacgtagtgatcgatgttgaaggcacagaaattccgttgccgattgtg
tatgaggcgcttgccagagggcgcgattatgttgattattccgggcttatcctgcacctt
ggcgaggattttaattcgttacggcgtctcttacttgacgcggctgcattgggtgaggtc
aagcctgattcgattcgaattccctcggcgcgaatgcatgcgctggactttgcccacatt
gaggccgggcgggagttgcgcgaaaaattgcagcacatgcaggatcttgccaatccggtt
cctgtaccaaacactgtgaacgcgcagttgcgcccctatcaggttgagggcttttcgtgg
ctcacgcatctggcgcgcgcagggatgggcggactgctcgccgacgatatggggctgggg
aaaacgctccagttgctcacaatgattgaggaggtgcgctccgcacctgcaaactccgcc
ccttcaaacacacgtcgcaaaacccgccagcgtaaaggccacacctcaacaaacgcaaca
acgcaaccgccggttctcgtcgtcgcaccaacatcggttgtgtctacgtgggctcaacaa
gccgaacagttcacgccacatctgcgggtcgaaaccgtcacggctgggagaaagaaacgc
gggaagagcctggaatctataacgcaccaggcagatgttatcgtcacctcctacgctatt
gctcgcatggatcgtgaagaatatcggagtcttgagtggggtgggcttattgcggatgaa
gctcaggcaattaaaaacccctcaaccgtggggtataaagcgttgcagatgcttgaacgt
ccctggacttttgccgtcacaggtacgcctgtggaaaattcgctcaacgatttggcggcc
cttctcgccttatgcacaccggggttgctcccctcgcgagcctcttttgcgcaaaacttc
cgcaaacctattgaagaatatggggacgaaaataccgcggaaatattgcagcgtctcatt
cgcccctttgtgatgcgacgccgcaaagctgaggttgccaccgatttacccccgcgtatt
gtgacggatatttcggttgatatgaccccggatcatgcccagatgtatcggcgtcgcctt
gaacgcgagcgccaggaagtgttggggctggtggataatatttccgaaaatcgggtgtct
attttggcttcacttacccgcttgcgccgcacggctattgatccgggactgtacgaggag
aaaacgcgggtgaaatccgctaaaacggagttccttattgaacatttgcgtgtcctgcta
ccggaaggtcaccgtgttcttgtgttttcacaattcccgacgtatttgaagcgtattgcg
aagcggttgcgtgaagaacacatcagtttttcgtatttggacggggcaactcggaaccgt
gatgatgcgattgctgattttaaggcggaggacgggtactcccccgtgttccttatttct
ttaaaagcgggcggaactggcttaacgctgacggaagccgattacgtgttcattatggat
gcgtggtggaatcctgcggttgaggaacaggcaattgatagggcgcaccggattgggcag
gataagcctgtgaatgtgtatcgtttagcatccaaagggacaattgaggagaaggttgtt
gccctgcaggaacataaacgcaaccttgcagaactcattgatgccggggcgagtggtccg
ataagtgcggaagatgtccgtgaacttctcaacttgccacccctatattaa
DBGET
integrated database retrieval system
