Actinotignum urinale: CJ184_004915
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Entry
CJ184_004915 CDS
T09101
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
auu
Actinotignum urinale
Pathway
auu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
auu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJ184_004915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
auu03021
]
CJ184_004915
03400 DNA repair and recombination proteins [BR:
auu03400
]
CJ184_004915
Enzymes [BR:
auu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJ184_004915
Transcription machinery [BR:
auu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJ184_004915
DNA repair and recombination proteins [BR:
auu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJ184_004915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WIK58609
LinkDB
All DBs
Position
1168689..1169678
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPVLNEVKLSDLRSRFILEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVTGVKEDVSEIILNLKELVVTSENDEPVLMYLRKQGPGEVTAADITPPAGVEILN
PELHIATLNDKGKLEINLSVERGRGYVSAALNKGDNDEIGRIPIDSIYSPVLKVSYKVEA
TRVEQRTDFDRLVVDVETKPSITPRDAIASAGKTLVELFSLAVDLNEEAEGIEIGPAPVV
EQRSSDLQRPITILNLPARSQNCLQREGIHTIGELILRSEADLLDIRNFGAKSIDDVKEE
LAKMDLSLKDSGTSYMGGYDDYMQFSYDL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgtcccgttctcaacgaggtaaaactttccgacctgcgttcacgc
ttcattcttgaaccgttggaacccggttttggctacacattgggtaattcccttcgtcgt
acattgctttcatccatcccgggtgcggcagtgacctctatccgcattgatggcgttctc
cacgagttctccacagttaccggtgtgaaagaagatgtttcggaaattatcctcaacctg
aaagaacttgttgttacttccgaaaacgatgaaccggttcttatgtaccttcgcaagcag
ggtccaggtgaagtgacggctgcagatattacgcctcccgcaggtgtagagattctcaac
ccggaacttcatatcgcaaccttgaatgacaagggcaaacttgaaatcaacctttcggtt
gaacgtggccgtggttatgtttccgctgctctgaacaagggtgataatgatgaaatcggc
cgtattccgattgattccatctactccccggtgctcaaagtttcctacaaggtcgaagca
acccgtgttgaacagcgtacagatttcgatcgcctcgtggtcgatgttgaaacgaagcct
tctattactccgcgagatgctattgcttccgcaggtaaaacactcgttgaactcttcagc
ctcgctgttgatttgaacgaggaagcagaaggcattgagattggtccggcgcccgtcgtc
gaacagcgttcatctgatttgcagcgccccatcaccattctcaacctccctgcacgttct
cagaactgcctccaacgcgaaggcatccacaccattggcgaactcattcttcgctctgaa
gctgatcttcttgatatccgcaactttggtgcaaagtccattgatgatgtcaaggaagaa
cttgccaagatggacttgagcttgaaggattcaggtaccagctacatgggtggttacgac
gactatatgcagttcagctacgatctttaa
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