Actinotignum urinale: CJ184_005115
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Entry
CJ184_005115 CDS
T09101
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
auu
Actinotignum urinale
Pathway
auu03420
Nucleotide excision repair
auu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ184_005115
03430 Mismatch repair
CJ184_005115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auu03400
]
CJ184_005115
Enzymes [BR:
auu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ184_005115
DNA repair and recombination proteins [BR:
auu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ184_005115
MMR (mismatch excision repair)
Other MMR factors
CJ184_005115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_30
Viral_helicase1
AAA_12
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
WIK58647
LinkDB
All DBs
Position
1220820..1223648
Genome browser
AA seq
942 aa
AA seq
DB search
MADNSQNSFEDALARLKKRMEKAQLPNTQVGFGSGATPPASHYGRRGHSDENNWKSKIPS
HITGDKTGHKTGDKTGETTGNKTGENSSYQSAQPVSHNDGAQVSVGKQHGVDHVAAVHIL
EGLNDQQREAVMHGEEPLLVVAGAGSGKTRVLTSRIAYLIATGRARPHEILAITFTNKAA
REMRERLWSMLGGLAKNMRIATFHSACVRILREEHKSAGLRSSFTIYDAQDAQRLMNMVC
REENIDIRSYPAKTLYHKVSNLKDELITPSEQSQRAKNQEEQVLAQAYSAYQDRLNAANA
VDFDDLIMRTVQMFQNNPELADSYRMRYKFILVDEYQDTNHAQYVLVKTLTGDASTSHRA
QLTVVGDADQSIYAFRGATIRNIEDFEHDFTDARTVMLEQNYRSTQNILSAANAVIANNY
GRRAKKLWTDSGSGAKIVGYVADAESDEARFVVEEIDNLRDAHGYAYKDFAVFYRTNAQS
RALEDMFVRTGIPYRIIGGTRFYERKEIKDALAYLQAAMNPDDTVSIRRVLNEPKRGLGA
KAEEHVANHAVKWGISFGAALQDVAHPAERGEVTGLTPRARTSMSAFATVLEETRALAET
GASPADVLDKALDDSGYVEALQKSSDPQDMSRLENLAELHSVAIEFGAQNPEADITDWLD
QLSLVSDTDKLEDTEEQEGEVTLMTVHTAKGLEFPVVFVTGLEDGTFPHIRSLGDEDELA
EERRLAYVALTRARQRLYLSRAATRSSWGAPQEFPPSRFLQEIPGELMEWRREESSQDIL
RRSAGYGGYDDGDDYGETYGSYGGWGSRGTRRGFSSGYDSQSYGDNSQRSSRMRGGLSGE
YSERGSRYRDDDNEDFEIVIGSGRRKMVGAKKVNASPGNTSEQDADGRKGLKVGDKVTHK
SFGTGKIVSFDGSGKGTVAKVAFSGGATKRLMLRFAPLKKVE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaattcacagaactcttttgaagatgcacttgcgcgactcaaaaaacgcatg
gagaaagcgcaacttcccaatacgcaggtcggatttggcagtggcgctacaccacctgca
tctcattatggtcgacgggggcacagtgatgagaacaattggaagagtaaaatcccgtcg
cacataactggtgataaaactggtcacaaaactggcgataaaacgggtgaaacaactggt
aacaaaactggtgaaaatagctcataccagagtgcacagcccgtgtcgcacaacgatggt
gctcaagtttcggtcggcaaacagcacggggttgaccacgttgcggcagtccacatcctt
gagggactcaacgatcaacagcgcgaagcggtcatgcacggcgaagagccgctcctcgtc
gtcgcgggggcgggatctgggaaaacgcgagttctcacatccagaatcgcgtaccttatc
gcaaccggacgcgcacgtccgcatgaaattctcgctatcaccttcaccaacaaagctgcg
cgtgaaatgcgagaacgcttgtggagtatgctcggaggcctcgcaaaaaatatgaggatt
gcgactttccactccgcatgcgtgcgaatcttgcgcgaagaacacaaaagtgcggggcta
cgctcctccttcacaatttacgatgcacaagatgcccagcgtctcatgaatatggtgtgc
cgtgaagaaaacattgatattcgtagctacccggcgaaaactctctaccataaagtatcc
aacctgaaagacgagctcattacgccctcagagcagtcacagcgcgcaaagaaccaggaa
gaacaggtgctcgcgcaggcatatagcgcctaccaagatcgcttgaatgccgcgaatgcc
gtcgattttgacgatttgattatgcgaaccgtacaaatgttccaaaataacccagaactc
gcggactcctacaggatgcgatacaaattcatcctcgtcgacgaatatcaggacaccaac
cacgcacaatacgttctcgttaaaacactcaccggggacgcctcaacctcacatcgagcc
caactcaccgtggtcggggatgcggaccaatcaatttacgcattccgcggggcgacgata
cgaaatattgaagatttcgaacacgattttacggacgctcggacagtgatgctggaacaa
aactaccgttccacacaaaatattcttagcgcggcgaacgccgttattgccaataattac
gggcggcgagctaaaaaactctggacagattcggggtctggcgccaaaatcgtcggatat
gtggcagatgcggaaagtgacgaagcgcggttcgtcgtcgaagaaatagacaatttacgg
gacgcacacggttacgcatataaagattttgccgttttttaccggaccaacgcgcaatcg
cgagccctggaggacatgtttgtccgcacaggaataccgtatcgtatcattggtggcaca
cgattctatgaacggaaggaaattaaggacgccctcgcgtatctccaggctgcaatgaac
cccgacgatacagtgtctatccgccgtgtcctcaacgaacccaagcgtgggctgggcgca
aaagcagaggaacacgtggcaaaccacgccgttaaatggggaatttccttcggggcggca
ctgcaggacgtcgcacatccggcagagcgcggggaagttacagggctaacccctcgggca
cgcacctccatgtctgcttttgctacagtgcttgaggaaacgcgggcgctcgcggaaacc
ggggcgagcccggcagacgttctcgataaggcactcgacgattccggttacgtcgaggcg
ctccaaaaatcttcggacccgcaagatatgtcacgcctggaaaatttggcggaactccat
tcggttgccatcgaattcggggcgcaaaatcccgaagctgatattacggattggcttgat
caactcagcctcgtctccgacacggacaaattagaggacaccgaggaacaggagggggag
gttacactcatgacagtccacaccgccaaaggtttggaattcccggttgtgtttgtgacg
gggcttgaggacggcaccttcccgcatatccgcagtttgggtgacgaagacgaactcgcg
gaagaacgccgccttgcctacgttgcgttaacgcgcgcccgccagcgactctacctttcc
cgcgcagctacacgctccagctggggagcgccccaagaattcccgccctcgcgattcctt
caagaaatccccggggaacttatggagtggcgtcgtgaagaatcatcgcaagacatattg
cggcgatcagccggttacggtgggtacgatgatggtgatgactacggtgaaacgtacggg
agctatggtggctgggggagccgcgggacacggcgaggattctcctcaggctatgattcg
caaagctacggcgacaattcgcagagaagttcacgaatgcgaggtggcctgagcggtgag
tattccgaacgtggttctcgatatagggacgacgataacgaagattttgaaatcgttatt
gggagtgggcgccggaaaatggtgggggcaaagaaagtcaatgcctcgcccggcaatact
tctgagcaggacgccgacggccggaaagggctaaaggtgggagataaagttacccataaa
tcctttggtacaggaaaaattgtgagtttcgacggaagtggtaaagggacggttgcgaaa
gtcgccttttctggtggagccacaaaacggctcatgctacgttttgccccgttgaaaaaa
gtggagtag
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